| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4868 |
|---|
| Symbol | |
|---|
| ID | 7110964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 5401894 |
|---|
| End bp | 5403831 |
|---|
| Gene Length | 1938 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643483082 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_002380093 |
|---|
| Protein GI | 218441764 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3349] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAT CATCACATTC TTCCGGGTTC ATCTCTCGAC GAACGGCATT AAAAGTAGTA
GGAATTGGGA CTTTAGGAGG AGTAGTGGGG TATTCTCGCT TTTCTAAGCC TCAACCTTTT
GTTTTTGAGC AAGATGCTTT ATCTTTACCC TGTGATCTCC CTCACTCTAA ATCAGTGGTT
GTGATTGGTG CTGGGTTAGC CGGGTTAGCT TGTGCTTACC AATTGAGTCA ACGGGGATTT
CAAGTCACTT TATTAGAGCG ATCGCCGAAT TTAGGCGGAA AAATTGCCAG TTGGACGATA
AGAGTGGACA AGGAAAAGTT TAAAATGGAA CATGGGTTTC ATGGTTTTTT TCCTCAATAT
TACAATCTCA ATAGTTTAAT AACCGAATTA CAAATTAAAG ATAATTTTAA ATCTTTAGAC
TTTTACTCTT TAGTTTTTCG TCATCAGGAA TATCAGCCGG AATTATTTCG TCCGACTAAT
ACGGCTTTTC CTTGGAATAT TGTCGATTTA GCCATTGCTT CTCCTAACCG GTTGCGCTGG
GGAATTAATT TAATTAATCC GGCTCACTGG CAGGTTTTTC GTGCTATTAC CGGCTTTCAA
ATTCCTAAAA GTTTTAATCG TCTGGATCAT CTTTCGGTGG CGGATTGGGC GGCGCAAGAT
TTTCCTAAAG GATTATATGA TCTGTATTTT CTTCCCTTTG CTAAATCGAG TCTTAACGCT
CCTGAACTGT TGAGTACCGG GGAATTATTA CAATTTTTCC ATTTTTATTT TTTTGGCAAT
CCTGAAGGAT TAGCTTTTAA GGGAACTAAG GATGATATGG GGACAAGTTT AGTTGTTCCT
ATGCAAAAAG CCATTGAACA GAAAGGGGGA AAAATTATCT CTCAAGCAAC GGTAAAAGAA
ATACAGGTAT CCGATCGCCA AATTGAATAT TTGACTTATC AACAGGGGAA TGATGTAACT
GATAGTCCTT TTTGGGTTGA ATCTAATCAA AATATTGAAG ATCAAACGTT AGACTATTAT
GGAACGGGCG ATCGGGTTTT TGCGGTTAAA CCGGGAGCGA TTGAAGCCCT TTCTTTAACT
TGTACTCATC AAGGATGTAC GGTTATGAGA CAGGAAAATG GGAGCTTTTT ATGTCCTTGT
CATGGAGCAT TATACGATCA ACAAGGACGA GTCATTCGAG GGCCGGCAAA GGGAAATTTA
TCCCAGTTTG AGATAGTTCA ACGAGACAAT CAAAGAATTA AATTAAAAGC TATATCTGAC
GATCCATTCT CTATAAAAGA GAAAATAGAG GCGGATTATT ATGTGATAGC AACGGATGTA
CCGGGGGTTA AACACTTATT TGAAAACATG ACGGGAGCAG TTAACCCAAC CCTTAAAACC
AAAATTGATC GATTAGCTGT AGCCGATCCT TTTGCGGTGG CTCGTTTTTG GTTTGATCGA
GATTTTGAAT GGGAATATAG TTATTTTACC TCTCTATCAG GCTATCAACT AACCGATAGT
ATTACCCTCT ATCATCGCAT TCAAGAACAA TTTATCGACT GGGCAAAACG AACCGGAGGC
AGTGTAGTTG AATTACACGC TTATTGTTAT AAAGAAACCG AATTTCCTAA TCAAGAAGTG
TTATTAAAAA CCTTTGAAAA AGAACTTTAT GAAATTGTTC CCGCTTTAAA ACCCGCTAGA
ATTTTACATC GAGAATTAGT CAATCAAAAG AATTTTTCGG GTTATCCTCC TAATAGTTAC
CAAGATCGTC CGACAACCGA GAGCGAAATT TCTAATTTAA TATTTGCCGG AGATTGGGTG
AAAATGCCGT TTCCTTGTGG TTTAATGGAA CGGGCGGTTA GTAGTGGGTT ATTAGCGGCT
AATGTAATTC TTCATCGAGA GGGACTACAA AGAAGAACGC TTTTTTCGGT CACTCCTGAA
GGGATGCTTA AAATTTAG
|
|---|
| Protein sequence | MNRSSHSSGF ISRRTALKVV GIGTLGGVVG YSRFSKPQPF VFEQDALSLP CDLPHSKSVV
VIGAGLAGLA CAYQLSQRGF QVTLLERSPN LGGKIASWTI RVDKEKFKME HGFHGFFPQY
YNLNSLITEL QIKDNFKSLD FYSLVFRHQE YQPELFRPTN TAFPWNIVDL AIASPNRLRW
GINLINPAHW QVFRAITGFQ IPKSFNRLDH LSVADWAAQD FPKGLYDLYF LPFAKSSLNA
PELLSTGELL QFFHFYFFGN PEGLAFKGTK DDMGTSLVVP MQKAIEQKGG KIISQATVKE
IQVSDRQIEY LTYQQGNDVT DSPFWVESNQ NIEDQTLDYY GTGDRVFAVK PGAIEALSLT
CTHQGCTVMR QENGSFLCPC HGALYDQQGR VIRGPAKGNL SQFEIVQRDN QRIKLKAISD
DPFSIKEKIE ADYYVIATDV PGVKHLFENM TGAVNPTLKT KIDRLAVADP FAVARFWFDR
DFEWEYSYFT SLSGYQLTDS ITLYHRIQEQ FIDWAKRTGG SVVELHAYCY KETEFPNQEV
LLKTFEKELY EIVPALKPAR ILHRELVNQK NFSGYPPNSY QDRPTTESEI SNLIFAGDWV
KMPFPCGLME RAVSSGLLAA NVILHREGLQ RRTLFSVTPE GMLKI
|
|---|
| |