Gene PCC7424_4842 details

Gene Information

• Locus tag: PCC7424_4842
• ID: 7110937
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 5378759
• End bp: 5380765
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 643483055
• Product: DNA sulfur modification protein DndD
• Protein accession: YP_002380067
• Protein GI: 218441738
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0419] ATPase involved in DNA repair
• TIGRFAM ID: [TIGR03185] DNA sulfur modification protein DndD

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 0.883756
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATTTTTA CCGAACTTAT CCTAGAAAAC TTTGGCCCTT ATGCTGGAAA ACATATAATC 
AACTTACGCC CAGAAATAGA AGAAAATACT CGTCCTATTA TCCTATTTGG AGGGATGAAT 
GGAGGGGGGA AAACGACTTT AATGGATGCT ATTCGTCTCG CTTTATATGG TTCTCGTGCC 
CAATGTTCAA CGCGCGGAAA TTTAGGTTAT AGTGATTTTC TAACTCAATC AGTAAATAGT 
CAAACTCCTC CTTATGAAAA AGCTAGAATT TATCTATCTT TTGAACTGTT TCAAGAAGAT 
GAGTTAGTAG AAATAACTGT TAATCGTTAT TGGGAAAGAA ACCCTGTAGA GGGGAAAGAT 
CATTTAGGAA TTATCCGAAC TGTATCAGGT CAAGAATCTC TCGATACAGG ACTAGCTAAT 
ACTTGGGATG AATATATAGA AACGTTACTC CCGTTAGGCA TTTCTAATTT ATTTCTTTTT 
GATGGAGAAC AGGTTAAAGA ATTAGCAGAA CAAGATATTC CCCCACAGCC GGTTATTGAA 
GCGATACAAT CTTTATTAGG ATTAGGATTA GCAGAAAAAT TGGCGATAGA CTTAGAGGTT 
TTAGTCAGTC GTAAACGGAA ACAAGTTGCT AAAGGATTAC AACTTGATAA CCTAGAAAAA 
ATCGAAGCCA AACTGAAACA ACACTACCAA GAAGAAGAAT TAGCAAAAGA AGAATTAGGA 
AAGTTAACTA ATCATCTTAA ACGTGCCCAA AATAAAGAAA AATTAGCGGA AGAAAAGTTT 
CGAGTTGAAG GAGGTAAAAT TGCTGCTAAA AAAACTAAAT TAGACTTAGA AAAAAAAGAC 
TTAGAAACTT CCCTAGACAC TCTGCGAAAA AATCTGACTC AATTAGCAGC AGGAGTTTTA 
CCTTTAGGAT TAATTACTCC TCTTCTTCAA CAAGTCCAAA ATCTAGGAGA ACAAGACTTA 
AAAAGTCAAC AATTTAAAAT GGCTCAATCT ATTTTAAAAG AGCGAGATGA ACGGCTTTTA 
AGTTATCTAA ATCAATTAAA TTTAAAATCA GACAATCTTG AAAAAATCAA CAATTTCTTA 
AGTCAAGAAA ATCAACAATT AACCGAAGAA TACGGAATAG AATCTTGGTT AAATCTGAAT 
GAAGAAGACT TAAAACAGTT AAATGATCTC TTAAATCTTC AACTTCCTCT ACAGCTTAAT 
TTAGCCCAAG AACAACTGAG TCGGTTACAT CACTTAGAAA CCGAATTAGA AAGTAAAGAA 
AAAGAATTAG TTTTATCTGC CTCTCCCGAA GACTATGATA AACTAGATAA AGCTTTACAA 
GAAGCGAAAC AAGAAGTCCG AAAATGTCAA ACCGCCTACG ATCTTTGTAA TCATCGTTGT 
CAAGAAATCC AAAAAGCGAT CAAAAAAACT AAACAAGAAC TCGAAAAATA TAGTCAAGAT 
GCCCTAGATT ATAAAAATGA CGAACATTTA ATCAAATCTG CCGCCAGAGT TCAAGAAACC 
TTAAAACTTT TTAAAGAACG GTTAACCTTA AAAAAATTAA ATAAATTGGA AGGAGAAGTC 
ACCGAATGCT TTAGATATTT ATTACATAAA TCAGATTTAG TTCATCGTGT CGCTATTGAT 
ACCCAAAACT TTAGTCTTTC CCTGTATGAT CCAACTGGAA AAGTTATCCC GAAACATCGT 
CTTTCCGCCG GAGAAAAACA ACTTTTAGCT ATCGCCTTTT TATGGGGGTT AGCGAGGGTT 
TCCGGCAGAA ATTTACCCGT AGCGATAGAC ACCCCATTAG GAAGACTAGA CTCCTCCCAT 
CGTAACAACT TAGTAGAACG TTATTTTCCG ACTGCTTCTC ATCAAGTCAT CCTCCTATCG 
ACAGATACGG AAATCGGAAA AACCGAAGTT CAAAAATTAA GAGAAATCGA TGCGATCGCT 
AAAGAATATC TGTTAAAATA TGACTCAAGT CAACGTCAAA CGACTGTCCA TCCTAATAGC 
TACTTTTGGC CTACTGAAAA GGAATAA 

 

Protein sequence

MIFTELILEN FGPYAGKHII NLRPEIEENT RPIILFGGMN GGGKTTLMDA IRLALYGSRA 
QCSTRGNLGY SDFLTQSVNS QTPPYEKARI YLSFELFQED ELVEITVNRY WERNPVEGKD 
HLGIIRTVSG QESLDTGLAN TWDEYIETLL PLGISNLFLF DGEQVKELAE QDIPPQPVIE 
AIQSLLGLGL AEKLAIDLEV LVSRKRKQVA KGLQLDNLEK IEAKLKQHYQ EEELAKEELG 
KLTNHLKRAQ NKEKLAEEKF RVEGGKIAAK KTKLDLEKKD LETSLDTLRK NLTQLAAGVL 
PLGLITPLLQ QVQNLGEQDL KSQQFKMAQS ILKERDERLL SYLNQLNLKS DNLEKINNFL 
SQENQQLTEE YGIESWLNLN EEDLKQLNDL LNLQLPLQLN LAQEQLSRLH HLETELESKE 
KELVLSASPE DYDKLDKALQ EAKQEVRKCQ TAYDLCNHRC QEIQKAIKKT KQELEKYSQD 
ALDYKNDEHL IKSAARVQET LKLFKERLTL KKLNKLEGEV TECFRYLLHK SDLVHRVAID 
TQNFSLSLYD PTGKVIPKHR LSAGEKQLLA IAFLWGLARV SGRNLPVAID TPLGRLDSSH 
RNNLVERYFP TASHQVILLS TDTEIGKTEV QKLREIDAIA KEYLLKYDSS QRQTTVHPNS 
YFWPTEKE