Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4814 |
Symbol | |
ID | 7110908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 5347321 |
End bp | 5349198 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643483027 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_002380039 |
Protein GI | 218441710 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.726318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATAA AAGACAGACC TCCCTCCCGT TCTCGCCAGA TAGGAAATAT CCTATTTTTT GTGGCGGGAT TATTTTTGTT AATCAATTTA CTATTTCCTC AATTATTCGG GCCATCCATT CCCAGAGTTC CCTACAGTCT TTTTATCGAT CAAGTCCAAG ATGGAGAAGT GGCCAAAGTT TATGTCGGAC AAAATGAAAT CCGTTACCAA TTAAAAGGAG AACAAGATCA ACTCGGACAA ATTTTCAGCA CAACCCCTAT TTTTGATTTA GAATTACCGA AACGCCTAGA AGATAAAGGC ATAGAATTTG CTGCTGCCCC ACCCCCTAAA AATAATTGGA TCGGCAGTAT CTTAAGTTGG GTCATTCCTC CGTTAATTTT TGTTGCTATT TGGCAATTTT TCCTAGGACG GGCAGGAGGC GGCGGAACTG CCGGCGCGTT ATCCTTTACG AAAAGTAAAG CGAAAGTGTA TGTCGAAGAA GATGCTACTC GCGTCACCTT TGAAGATGTA GCCGGAGTTG ATGAAGCAAA AATAGAATTA GCAGAAATTG TCGGCTTTCT CAAAAGTCCC CAACGTTACA ACGCCATCGG GGCGAGAATT CCTAGAGGGG TGTTATTAGT CGGTCCTCCC GGAACCGGTA AAACCCTCTT AGCCAAAGCC GTAGCCGGAG AAGCAAAAGT TCCCTTTTTT AGTATATCAG GGTCAGAATT TGTCGAATTA TTCGTCGGGG CAGGTGCGGC CAGAGTTCGG GACTTATTTG AACAAGCGAA AAAGAAAGCG CCCTGTATCA TCTTTATTGA TGAATTAGAT GCCATCGGTA AATCTCGCGC CGGTAACGGT TTTGTCGGGG GAAATGATGA ACGGGAACAA ACTTTAAACC AGTTGTTAAC CGAGATGGAC GGGTTTAGCG CTGGAGATGC TACCGTCATT GTCCTCGCCG CCACCAACCG CCCCGAAACT TTAGACCCTG CCCTTTTACG TCCCGGACGC TTTGACAGGC AAGTTTTAGT CGATCGTCCT GATTTAAGCG GTCGTCTCAA AATTTTAGAA ATCTACGCCC AAAAAGTCAA GTTAGATAAG GATGTAGACT TAAAAGAAAT TGCCACCCGT ACTCCGGGGT TTGCCGGGGC AGACTTAGCG AATTTAATTA ACGAAGCCGC CTTACTCGCG GCCCGTAATG AACGGACTAC CGTCGGTCAA GAAGACTTAA GAGAAGCGAT AGAACGAATT GTAGCCGGAT TAGAGAAGAA AAGCCGGGTA CTCTCGGAAA AAGAAAAGAA AATCGTTGCT TATCATGAAG TCGGTCATGC TTTAGTCGGC GCTTTAATGC CGGGTGGGGG AAAAGTCGCC AAAATTTCCA TCGTTCCTAG AGGAATGGCC GCTTTAGGAT ATACCTTACA AATGCCGACA GAAGACCGTT TCTTAATGGA TGAGTCGGAA TTACGAGATC AAATTGCCAC CTTACTCGGT GGACGTGCCG CAGAAGAGAT TATCTTTGGT AGTATTACCA CAGGGGCGGC TAATGATTTA CAACGGGCGA CGGACTTAGC AGAAAGAATG GTCACGACTT ACGGCATGAG TAAAGTCTTA GGGCCATTAG CCTATGAAAA AGGACAGTCA AACAACTTTT TAGGCAATGA CATGATGAAC CCCCGTCGCA TGGTTAGCGA TGATACAGCC AAAGCGATCG ATGATGAAGT AAAAGAGATC GTAGAAAATG CTCATCAAAA AGCCTTAGCC ATCTTAAAAC ACAATCAGGG TTTATTAGAA GAAATTGCCC AAAAAATCCT AGAACAAGAA GTCATCGAAG GAGATCAATT ACAAGAGTAT CTCAATCGAG TTCAATCTGG TGACGGGAAA GTGACCGTTT CTGTTTAA
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Protein sequence | MSIKDRPPSR SRQIGNILFF VAGLFLLINL LFPQLFGPSI PRVPYSLFID QVQDGEVAKV YVGQNEIRYQ LKGEQDQLGQ IFSTTPIFDL ELPKRLEDKG IEFAAAPPPK NNWIGSILSW VIPPLIFVAI WQFFLGRAGG GGTAGALSFT KSKAKVYVEE DATRVTFEDV AGVDEAKIEL AEIVGFLKSP QRYNAIGARI PRGVLLVGPP GTGKTLLAKA VAGEAKVPFF SISGSEFVEL FVGAGAARVR DLFEQAKKKA PCIIFIDELD AIGKSRAGNG FVGGNDEREQ TLNQLLTEMD GFSAGDATVI VLAATNRPET LDPALLRPGR FDRQVLVDRP DLSGRLKILE IYAQKVKLDK DVDLKEIATR TPGFAGADLA NLINEAALLA ARNERTTVGQ EDLREAIERI VAGLEKKSRV LSEKEKKIVA YHEVGHALVG ALMPGGGKVA KISIVPRGMA ALGYTLQMPT EDRFLMDESE LRDQIATLLG GRAAEEIIFG SITTGAANDL QRATDLAERM VTTYGMSKVL GPLAYEKGQS NNFLGNDMMN PRRMVSDDTA KAIDDEVKEI VENAHQKALA ILKHNQGLLE EIAQKILEQE VIEGDQLQEY LNRVQSGDGK VTVSV
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