Gene PCC7424_4814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_4814 
Symbol 
ID7110908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5347321 
End bp5349198 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content45% 
IMG OID643483027 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_002380039 
Protein GI218441710 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.726318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATAA AAGACAGACC TCCCTCCCGT TCTCGCCAGA TAGGAAATAT CCTATTTTTT 
GTGGCGGGAT TATTTTTGTT AATCAATTTA CTATTTCCTC AATTATTCGG GCCATCCATT
CCCAGAGTTC CCTACAGTCT TTTTATCGAT CAAGTCCAAG ATGGAGAAGT GGCCAAAGTT
TATGTCGGAC AAAATGAAAT CCGTTACCAA TTAAAAGGAG AACAAGATCA ACTCGGACAA
ATTTTCAGCA CAACCCCTAT TTTTGATTTA GAATTACCGA AACGCCTAGA AGATAAAGGC
ATAGAATTTG CTGCTGCCCC ACCCCCTAAA AATAATTGGA TCGGCAGTAT CTTAAGTTGG
GTCATTCCTC CGTTAATTTT TGTTGCTATT TGGCAATTTT TCCTAGGACG GGCAGGAGGC
GGCGGAACTG CCGGCGCGTT ATCCTTTACG AAAAGTAAAG CGAAAGTGTA TGTCGAAGAA
GATGCTACTC GCGTCACCTT TGAAGATGTA GCCGGAGTTG ATGAAGCAAA AATAGAATTA
GCAGAAATTG TCGGCTTTCT CAAAAGTCCC CAACGTTACA ACGCCATCGG GGCGAGAATT
CCTAGAGGGG TGTTATTAGT CGGTCCTCCC GGAACCGGTA AAACCCTCTT AGCCAAAGCC
GTAGCCGGAG AAGCAAAAGT TCCCTTTTTT AGTATATCAG GGTCAGAATT TGTCGAATTA
TTCGTCGGGG CAGGTGCGGC CAGAGTTCGG GACTTATTTG AACAAGCGAA AAAGAAAGCG
CCCTGTATCA TCTTTATTGA TGAATTAGAT GCCATCGGTA AATCTCGCGC CGGTAACGGT
TTTGTCGGGG GAAATGATGA ACGGGAACAA ACTTTAAACC AGTTGTTAAC CGAGATGGAC
GGGTTTAGCG CTGGAGATGC TACCGTCATT GTCCTCGCCG CCACCAACCG CCCCGAAACT
TTAGACCCTG CCCTTTTACG TCCCGGACGC TTTGACAGGC AAGTTTTAGT CGATCGTCCT
GATTTAAGCG GTCGTCTCAA AATTTTAGAA ATCTACGCCC AAAAAGTCAA GTTAGATAAG
GATGTAGACT TAAAAGAAAT TGCCACCCGT ACTCCGGGGT TTGCCGGGGC AGACTTAGCG
AATTTAATTA ACGAAGCCGC CTTACTCGCG GCCCGTAATG AACGGACTAC CGTCGGTCAA
GAAGACTTAA GAGAAGCGAT AGAACGAATT GTAGCCGGAT TAGAGAAGAA AAGCCGGGTA
CTCTCGGAAA AAGAAAAGAA AATCGTTGCT TATCATGAAG TCGGTCATGC TTTAGTCGGC
GCTTTAATGC CGGGTGGGGG AAAAGTCGCC AAAATTTCCA TCGTTCCTAG AGGAATGGCC
GCTTTAGGAT ATACCTTACA AATGCCGACA GAAGACCGTT TCTTAATGGA TGAGTCGGAA
TTACGAGATC AAATTGCCAC CTTACTCGGT GGACGTGCCG CAGAAGAGAT TATCTTTGGT
AGTATTACCA CAGGGGCGGC TAATGATTTA CAACGGGCGA CGGACTTAGC AGAAAGAATG
GTCACGACTT ACGGCATGAG TAAAGTCTTA GGGCCATTAG CCTATGAAAA AGGACAGTCA
AACAACTTTT TAGGCAATGA CATGATGAAC CCCCGTCGCA TGGTTAGCGA TGATACAGCC
AAAGCGATCG ATGATGAAGT AAAAGAGATC GTAGAAAATG CTCATCAAAA AGCCTTAGCC
ATCTTAAAAC ACAATCAGGG TTTATTAGAA GAAATTGCCC AAAAAATCCT AGAACAAGAA
GTCATCGAAG GAGATCAATT ACAAGAGTAT CTCAATCGAG TTCAATCTGG TGACGGGAAA
GTGACCGTTT CTGTTTAA
 
Protein sequence
MSIKDRPPSR SRQIGNILFF VAGLFLLINL LFPQLFGPSI PRVPYSLFID QVQDGEVAKV 
YVGQNEIRYQ LKGEQDQLGQ IFSTTPIFDL ELPKRLEDKG IEFAAAPPPK NNWIGSILSW
VIPPLIFVAI WQFFLGRAGG GGTAGALSFT KSKAKVYVEE DATRVTFEDV AGVDEAKIEL
AEIVGFLKSP QRYNAIGARI PRGVLLVGPP GTGKTLLAKA VAGEAKVPFF SISGSEFVEL
FVGAGAARVR DLFEQAKKKA PCIIFIDELD AIGKSRAGNG FVGGNDEREQ TLNQLLTEMD
GFSAGDATVI VLAATNRPET LDPALLRPGR FDRQVLVDRP DLSGRLKILE IYAQKVKLDK
DVDLKEIATR TPGFAGADLA NLINEAALLA ARNERTTVGQ EDLREAIERI VAGLEKKSRV
LSEKEKKIVA YHEVGHALVG ALMPGGGKVA KISIVPRGMA ALGYTLQMPT EDRFLMDESE
LRDQIATLLG GRAAEEIIFG SITTGAANDL QRATDLAERM VTTYGMSKVL GPLAYEKGQS
NNFLGNDMMN PRRMVSDDTA KAIDDEVKEI VENAHQKALA ILKHNQGLLE EIAQKILEQE
VIEGDQLQEY LNRVQSGDGK VTVSV