Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4657 |
Symbol | |
ID | 7107674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 5161406 |
End bp | 5162500 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643482874 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_002379887 |
Protein GI | 218441558 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.000431802 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTCGGC AACACCGGAT AACCTTACTT CCTGGCGATG GGATTGGCCC AGAAATTCTG TCCGTCACCG TAGATGTCTT AAAAACCATT GGTAAACAAT TCGACATACA ATTTGAGTTT CAAGAAGCCC TCATCGGCGG TGCTGCCATT GATGCAACGG GAAACCCTCT ACCGGAAGAA ACTTTAACCC TGTGTCGTAA TAGTGATGCC GTTCTTCTAG CGGCCATTGG GGGGTATCAA TGGGACAGTT TACCCCGTCA TCAACGCCCA GAAACCGGAT TATTAGGCAT TAGAGCCGGT TTGGGCTTAT TTGCCAACTT ACGCCCGGCG ACTATTTTAC CTCAGTTAAT TGATGCTTCT ACCCTCAAAC GAGAAGTGGT AGAAGGGGTA GATATTATGG TGGTGCGAGA ACTAACCGGC GGGATCTATT TTGGTCAACC CAAAGGCATT TTTGAGACAG AAACCGGGGA AAAACGGGGA GTCAATACGA TGGCTTACAC AGACTCAGAA GTTGACCGCA TTGCTAAAAT AGGCTTTGAA ACCGCCCAAA AACGCTCCGG CAAACTTTGC TCGGTAGATA AGGCTAATGT ATTAGATGTG TCTCAATTAT GGCGCGATCG CGTCACCTTA ATGGGGAAAA ACTACCCAGA TGTAGACCTG TCCCATATGT ATGTCGATAA TGCCGCCATG CAGCTAGTCC GCAATCCGAA ACAATTTGAT ACCATTGTGA CTGGTAATAT GTTTGGGGAT ATTCTCTCCG ATGCCGCCGC CATGTTAACC GGTAGTATTG GGATGTTACC TTCTGCCAGT TTAGGCGCAG ATGGGCCAGG ATTATTTGAA CCCGTTCATG GATCAGCCCC AGACATTGCC GGACAAAACA AAGCTAACCC TCTAGCTCAA GTTCTCAGTG CCGCGATGAT GTTACGATAT GGGTTAAACG AACCCGAAGC CGCCAGTAAA ATTGAACAAG GCGTTTTAGC CGTCTTAGAA AAAGGATACC GCACCGGGGA TATTATGTCA GAAGGAATGA CCTGGGTGGG ATGTCAAGAA ATGGGGGAAG TTTTAATGAA TGTCTTAGAA TCTTTACATC AATAA
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Protein sequence | MTRQHRITLL PGDGIGPEIL SVTVDVLKTI GKQFDIQFEF QEALIGGAAI DATGNPLPEE TLTLCRNSDA VLLAAIGGYQ WDSLPRHQRP ETGLLGIRAG LGLFANLRPA TILPQLIDAS TLKREVVEGV DIMVVRELTG GIYFGQPKGI FETETGEKRG VNTMAYTDSE VDRIAKIGFE TAQKRSGKLC SVDKANVLDV SQLWRDRVTL MGKNYPDVDL SHMYVDNAAM QLVRNPKQFD TIVTGNMFGD ILSDAAAMLT GSIGMLPSAS LGADGPGLFE PVHGSAPDIA GQNKANPLAQ VLSAAMMLRY GLNEPEAASK IEQGVLAVLE KGYRTGDIMS EGMTWVGCQE MGEVLMNVLE SLHQ
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