Gene PCC7424_4563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_4563 
Symbol 
ID7108313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5044400 
End bp5046715 
Gene Length2316 bp 
Protein Length771 aa 
Translation table11 
GC content38% 
IMG OID643482781 
Productsignal transduction histidine kinase 
Protein accessionYP_002379794 
Protein GI218441465 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains
[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.633448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCC AAAATCCCCT AAAAAATCTA TTTTGGTTAA CTCAGGTATT ACTCACATAT 
CCCCCAAGCG TAACCCCCCA AACTTCCCTA AAAGAAGTCA TTACCCTAAT GCACAAAGAA
AACTCAAGTT GTGTATTAGT GCTACAAGAA GATCAATTTA TTGGCTTAAT CACCGAAAGA
GATATTATCC GATGTTTAGC CACCCCAAAT AACCCCCAAA CTTTACCCAT CACGGAAGCG
CTCGATCAAA AAACGATTAC CCTAAAAGAC ATTACTCAAC TTAAACTCGA TCGCGTTATT
AACCTATTAT TAGAAAATCA TTTCTCCCAT TTAGCCGTTC TGAAAACCAA CAACCAACCT
TTAGGAGTAT TAAGCGCCGA AAGCCTGTTA ACCGTCATTT TAGGATTACA ACATCAAGTC
TCTCAACTCG AAGCCCAACA TCAAGAAAGA GGAAGAATAG CCGCCGCCCT CAAAGATGTG
GAAGCCCGTT ATGCCACCTT AGTTTCTGCC GCACCAGTAG GTATTTTTCG GACAGATGTA
GAAGGACATT GTTCCTATGT TAATGAACGT TGGGGCGAAA TTACGGGTTT ATCTCGTCAA
GACGCTATGG GTATGGGGTG GCTAATTCGG GTACACTCCG ACGATCGAGA AAGAATTACC
CGGCAATGGT ATCGCTCTAC ACAAACCCAT ATCCCTTTTC GCTCAGAATA CCGCTTTCAA
CACAAAGATG GAACGCTCAT CTGGGTATTG GGGGAAGCTG TCGAAGAACG ATCACCCAAC
GGCGAATTAA TCGGATATAT TGGCACAATA ACCGACATTA GCGATCGCAT TCAAGCAGAG
GAAGCCTTAG CCAAAAGTGA AGCCACCAAC CGAGCTTTAC TGCAAGCTTT ACCGGATATG
CTATTACGTC ATAGTCGCCA AGGGACTTAT GTTGATATTA TTTCCTCTGG AGAGTTAAAA
CCTTTTATTT CCCCAAAAGA ATTAATCGGA AAACATCCGG AAGATATTTT ACCCCCCCAA
GTCGCCAAAA TAGCCAATAA AGCCTTAGAA GAAGCTTTAC GAACTAATGA ATTACAAACT
TATGAATATC AACTGCAAAT AGAAGATCAC GAATGGCGAG ACTATGAAGC GCGAGTCGTT
AGTACAGGAA ATGGTGAGAT TTTATCAATT GTACGGGATA TCAGCGAACG TAAACGCAGC
GAAACAGAAC GTCAAATTGC AGAAGCCGCG TTACAACAAT TAAATACTCA ATTAGAGGCT
AGAGTTGAAC AAAGAACCCT GGCTTTACGG GAAAGTGAAG AAAGATTTCG CAAAATTTTT
GAAGAAAGTC CCATCGGAAT GGCTTTAGTC GGATTAGACT ATCATTTTTT AAAAGTAAAT
ACTGTTTTAT GTCAAATGTT GGGATATACA GAATTAGAAT TACTTCAACT TAAATTTGAT
GAAATTACCC ATCCCGAAGA TCGACAAATG AGTTCTCAAC TTGCCTTAGA ACTGTTTCAA
GGGATAACCT CCTCTGCTCA GATCGAAAAA CGTTACATTA AGAAAAATGG GGCAATTGTT
TGGGTTAATA TTACCACTTG TCTCATTCAT CAATCTGATG GCAACCCTTT ATATGCTCTT
TCTTTAATTG AAGATATTAG CGAAAAGAAA AAGGCCGAAG AGGAACGAAA ACGGGCAGAA
GTTGAACTGA AAACCTCTCT ACAGCAAAAA GAATTATTAC TGAAAGAAGT CCATCATCGA
GTTAAAAATA ATCTCCAGGT TATCTCTAGC CTTTTTTCTT TACAATCCCA ATATATTGAA
GATTCTAACA TTCTTTCTAT TTTAGAAGAT AGTCAAAATA GAATTAGTTC GATGGCCTTA
ATCCATGAAA AACTTTATCA ATCGGAAAAT TTAGCCAAAA TTGATTTTAA AGATTATATT
CAAACTTTAG TGAAATATTT ATTAACGTCC TACAATATTA ATCCTCAATT AATTCACCTA
GATTTAAATA TTGAAGACAT TTCTCTTGAT TTAGATCAAG CCATTGCTTG TGGACTGCTC
CTGAATGAAT TAGTGTCTAA TTCCTTAAAA CACGCCTTTC CTACTCCCTG GGAGAAACCC
GGTAAGATTA GTATTAATTT TACGATTGTT AAAAAACAAC TATTCTCTCT GAAGATAGAG
GATAATGGAA TAGGTTTACC GGAAGGTTTA AATGTAAAGA CAACTCCATC TCTAGGTTTA
CGGTTAGTTC GTGCTTTAAC CCGTCAACTC AAAGGTACAT TAGAAATGTA TAACAATAAC
GGTGCTGTTT TTCAATTGAT CTTTCCTCAA CAGTAA
 
Protein sequence
MQPQNPLKNL FWLTQVLLTY PPSVTPQTSL KEVITLMHKE NSSCVLVLQE DQFIGLITER 
DIIRCLATPN NPQTLPITEA LDQKTITLKD ITQLKLDRVI NLLLENHFSH LAVLKTNNQP
LGVLSAESLL TVILGLQHQV SQLEAQHQER GRIAAALKDV EARYATLVSA APVGIFRTDV
EGHCSYVNER WGEITGLSRQ DAMGMGWLIR VHSDDRERIT RQWYRSTQTH IPFRSEYRFQ
HKDGTLIWVL GEAVEERSPN GELIGYIGTI TDISDRIQAE EALAKSEATN RALLQALPDM
LLRHSRQGTY VDIISSGELK PFISPKELIG KHPEDILPPQ VAKIANKALE EALRTNELQT
YEYQLQIEDH EWRDYEARVV STGNGEILSI VRDISERKRS ETERQIAEAA LQQLNTQLEA
RVEQRTLALR ESEERFRKIF EESPIGMALV GLDYHFLKVN TVLCQMLGYT ELELLQLKFD
EITHPEDRQM SSQLALELFQ GITSSAQIEK RYIKKNGAIV WVNITTCLIH QSDGNPLYAL
SLIEDISEKK KAEEERKRAE VELKTSLQQK ELLLKEVHHR VKNNLQVISS LFSLQSQYIE
DSNILSILED SQNRISSMAL IHEKLYQSEN LAKIDFKDYI QTLVKYLLTS YNINPQLIHL
DLNIEDISLD LDQAIACGLL LNELVSNSLK HAFPTPWEKP GKISINFTIV KKQLFSLKIE
DNGIGLPEGL NVKTTPSLGL RLVRALTRQL KGTLEMYNNN GAVFQLIFPQ Q