| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4527 |
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| Symbol | |
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| ID | 7108277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 5005727 |
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| End bp | 5006683 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643482745 |
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| Product | RNA polymerase sigma factor SigD |
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| Protein accession | YP_002379758 |
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| Protein GI | 218441429 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.479044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTG CTAAAAATCC TACAGATCCT GTACGCGCTT ATCTTAGAGA AATCGGTCGA
GTTCCGTTAT TAACCCATGA AGAAGAAATC GTTTTGGCTA AACGGGTTCA GCGATTCATG
GCCTTACAGG ACATCAAAGA CGCTTTAACA CAAACCCTTA AACGTGAACC CCAAGACTCA
GAATGGGCTA GTGCTGCTAA AATTACCGAG GAAGAATTAC ATCGTGCCAT TGCTGCCGGC
AAAGCGGCTA AAGAAAAAAT GGTAGAGGCT AACTTACGCT TAGTGGTATC GGTAGCGAAA
AAATACCTCA AACGTAATTT AGACTTATTA GATTTAATTC AGGAAGGAAC AATCGGAATG
CAGCGAGGGG TAGAAAAATT TGACCCAACT AAAGGGTATA GATTTTCTAC TTATGCCTAT
TGGTGGATTC GTCAAGCCAT TACTAGAGCG ATCGCCGAAA AAAGCCGCAC AATTCGTCTT
CCGATTCACA TTACCGAAAA ATTAAATAAA ATTAAAAAAG CACAGCGTCA ATTATCTCAA
GCTAAAGGAC GAGCGGCTAC CATATCAGAA CTAGCAGAAG AACTAGAATT AACTCCTAGA
CAAGTTCGGG ACTATTTAGA ACGAGCGCGT CAACCTCTTT CATTAGATTT AAAAGTAGGA
GATAATCAAG ATACAGAACT CGGAGAACTG TTAGAAGATA CGGGAACTTC CCCAGAGGAT
TATGCCACCC ACTCCTCTTT ACAAGTAGAT TTAGAAAAAT TGATGTCTGA TTTAACCCCT
CAACAAAAGG AGGTACTCGC CTTAAGATTC GGATTGGTTG ATGGACAACC GTTAACCTTA
GCTAAAATAG GAGTCCGTTT AAACATTAGT CGAGAACGAG TTAGACAAAT TGAACGAGAA
GCTCTTTCTA AATTGCGAAA ACGCAAAGGC AATATTAAAG AATATCTCGC CAGTTAG
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| Protein sequence | MKTAKNPTDP VRAYLREIGR VPLLTHEEEI VLAKRVQRFM ALQDIKDALT QTLKREPQDS
EWASAAKITE EELHRAIAAG KAAKEKMVEA NLRLVVSVAK KYLKRNLDLL DLIQEGTIGM
QRGVEKFDPT KGYRFSTYAY WWIRQAITRA IAEKSRTIRL PIHITEKLNK IKKAQRQLSQ
AKGRAATISE LAEELELTPR QVRDYLERAR QPLSLDLKVG DNQDTELGEL LEDTGTSPED
YATHSSLQVD LEKLMSDLTP QQKEVLALRF GLVDGQPLTL AKIGVRLNIS RERVRQIERE
ALSKLRKRKG NIKEYLAS
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