Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4432 |
Symbol | |
ID | 7111155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 4911040 |
End bp | 4912845 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643482650 |
Product | ABC transporter related |
Protein accession | YP_002379664 |
Protein GI | 218441335 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCTCAGC AACAAAAATC GAAACAATCC CCACATCCTT TAGTCCGTTT AATGAAATAT GGGCGAAGAT ACCGAGTTTT AATTTGGCAA GCGGTTACTT GCTCTATTTT CAACAAAATC TTTGATTTAG CCCCGCCGGC GTTAATTGGT GCAGCAGTGG ATGTAGTCGT TCAACGTCAA GATTCTATTA TTGCTAAATT AGGAATCACA GATATTTTTG GACAACTTTT ATTTTTATCG GTATTATCTG CCCTAGTTTG GGGATTAGAA TCATTATTTC AATATACTTA TGAGAGATTA TGGCGTAATT TAGCCCAAAA TATTCAACAT GATCTCCGTT TAGATGCCTA TAGTCATATT CAAGATTTAG AATTAGCCTA TTTTGAAGAC CGTTCAACGG GAACTCTATT ATCTATTCTC AATGATGATG TTAACCAACT GGAAAGATTT TTAGATATTG GGGCTAATGA AATTTTACAG GTCATTACCA CCGTCATTAT TATTAGTGGA GCTTTCTTTA TTCTAACTCC TAATACCGCT TGGATGGCGA TGTTACCTAT TCCTTTTATT TTATGGGGGT CAATTGCCTT TCAAAATCTT CTTGCTCCTC GTTATGGAGA TGTGCGGGAA AAAGTCAGTT TACTTAATTC TCGTTTAGCC AATAATTTAA GCGGTATTAC TACCATTAAA AGCTATACCA CAGAAAGATA TGAAATAGAA CGTCTTCGAG TTGATAGTGA AGCCTATCGC CAAAGTAATC AACGGGCAAT TAAATTAAGT GCAGCCTTTG TTCCTTTAAT TCGTATCATT ATATTAGCTG GATTTACGGC GATTTTATTA TTTGGAGGTA TGGAGGTTGT AGAGGGAAGA TTAGCCGTAG GAACTTATAG CGTTTTAGTC TTTTTAACTC AGCGCTTATT ATGGCCTCTC ACTCGTCTAG GACAAACCCT AGATTTATAT CAACGCGCTA TGGCCTCCAC TAACCGAGTG ATGAATTTAT TAGATACTCC TATTGCAATT CATTCAGGTA ATATTGCTCT GCCAGTTTCC ACCATTAAAG GGGAAATCGT CTTAGACAAT ATCAGTTTTG CCTATCAAGA AAGATATCCC GTCATAGAAA ATTTATCCTT ACATATTCCC GCCGGAAAAA CGATCGCTAT TGTTGGATCT ACTGGTTCGG GAAAAAGTAC CCTAGTCAAA CTTTTATTAA GACTTTATGA AGTCCAAAGG GGAAGAATTA CCCTAGATGG AATTGATATA AATGATATTA TTCTGTATGA TTTGCGTCGA GGAATAGGGT TAGTGAGTCA GGATGTATTT TTATTTCATG GAAGCGTGAG AGAAAATATT GCTTATGGAA GTCCTGACGC GACAATAGAT GACATTATGA TGGCCGCTAA AGCAGCAGAA GCGCACGAAT TTATTATCAA ACTTCCTCAA GGATACGACA CCATTGTCGG GGAAAGAGGA CAAAAATTAT CCGGCGGACA ACGGCAAAGA ATTTCTATTG CTCGTGCTAT TTTAAAAGAT CCACCTATAT TAATTTTAGA TGAGGCCACC TCGGCGGTAG ATAATGAAAC AGAAGCCGCT ATTGCTCGGT CTTTAGAAAA GATCACCCAA AATCGGACTA CAATTGCGAT CGCTCATCGC TTATCTACCA TTCGTCATGC TGAGTGTATT TATGTTTTAG AATACGGACA AATAGTAGAA AGAGGAACTC ATGAAGAGTT GTTAGAAAAA GAAGGAATTT ATGCTAATTT GTGGCGAGTG CAAACCGGGA TAAGACAGTT AGGACTGACC CATTAA
|
Protein sequence | MSQQQKSKQS PHPLVRLMKY GRRYRVLIWQ AVTCSIFNKI FDLAPPALIG AAVDVVVQRQ DSIIAKLGIT DIFGQLLFLS VLSALVWGLE SLFQYTYERL WRNLAQNIQH DLRLDAYSHI QDLELAYFED RSTGTLLSIL NDDVNQLERF LDIGANEILQ VITTVIIISG AFFILTPNTA WMAMLPIPFI LWGSIAFQNL LAPRYGDVRE KVSLLNSRLA NNLSGITTIK SYTTERYEIE RLRVDSEAYR QSNQRAIKLS AAFVPLIRII ILAGFTAILL FGGMEVVEGR LAVGTYSVLV FLTQRLLWPL TRLGQTLDLY QRAMASTNRV MNLLDTPIAI HSGNIALPVS TIKGEIVLDN ISFAYQERYP VIENLSLHIP AGKTIAIVGS TGSGKSTLVK LLLRLYEVQR GRITLDGIDI NDIILYDLRR GIGLVSQDVF LFHGSVRENI AYGSPDATID DIMMAAKAAE AHEFIIKLPQ GYDTIVGERG QKLSGGQRQR ISIARAILKD PPILILDEAT SAVDNETEAA IARSLEKITQ NRTTIAIAHR LSTIRHAECI YVLEYGQIVE RGTHEELLEK EGIYANLWRV QTGIRQLGLT H
|
| |