| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4375 |
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| Symbol | |
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| ID | 7111098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 4848103 |
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| End bp | 4849725 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643482594 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002379608 |
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| Protein GI | 218441279 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.352902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTA ACTTAATTGT CTCAGAAAAG CTAGCTAGAC AACAGCAAAA ACTCATCACT
TTAAGTAAGT ATGTCGAGAA ATATCCCCAA GGATGGAAAA AAAGATTAGA ATTGGCTAAT
TTACTTTATG AGATGGGAAA CTGGCAACAA GCAGTTACAG AATATTATCA AGTAATTGAA
CGACAACCTC AATTAATTAA TGTGCGACTA CAATTGGGGA AAATCTTGCA GCTAATGGGA
CTCAAAAAAG AGGCAAGAGA AATCTATGAA CAAGCTTTAT TGTTGTCTGA AAATGATGGG
ACTCAGCATC ATATAAAAGG ATTAATTGCT CTTTGCACAG GGGAGAGTCA GGAGGCAATT
ACTGCTTTTA ATTTAGCCAC GAGTTTAGAA CCTAAAAAAG TCGTTCACTG GTTAGCTTTG
GCACAGGTAC ATCAGGGTAG AGAAAGTCCC CTTGGTACTC TCAGTGCTTT GGAGCAGGTT
TTGACCATTA ACCCAGATGA TGTTATGGCC TTGATTTACA GCTATGACGC GCTCTTGGAG
GTGGGGGATA TAAGTGCGGC TAGAGGGCGC TTAAACAGGC TTATAGTCAT AGCTGGAGAT
GATTTTCGGG TACTGCAACG GCAAATAGCT CAGTGCTGTC AGATGAGATT AGTTTCTGGT
GAGGAGGGTA AACAGACTAA AAAAATGATT ACTTCTCTAC TGCGACTGAC TCCTGATGGA
GTTGGGGCTT ATAATTCCCT GGCCTATTAT CATATTTTAC GGGGGGATTG GCGGCAAGGT
GTAGAGGTCT TAGCCAAGTT TACCGCCGAA CACCCTCAGC ATCCTTATGG TTGGTATTTC
TATGGGCGCT GTTTATCCGA TACGGGAGAG TATCAGAAGG CGGCGCTGAT GATGGAGAAA
GCTTATCATC TCTATCCCGA TGATTGTGAG ATTTATCGGG GGTTGTGTGA AATTTTACCC
TTTGTGACCT CTCCCCCTAC CCCTCTCCAC CTCCCCCTAC CCCCTCCTGC GAGGAGGGGG
GAAAGCGGAA CATCTTTTAT TTTTGGAGAG GGGAGTAAGA TAACTCTTGC TTCGATAGTT
GAGGAAATGT TGAAACGTTT TCCTGAGCTA TGGAGTGTTT GGGCGACTGC CGGACGGGTA
TTAGTAGAAC ATTTTCAAGA GTTTGAACGA GGGTGTCAGG TTTCTCAACA AGGGACGGAA
TTACAACCCC AGTTAGCTGA TGCTTGGTTT CGTCATGGGC GGGTTTTAGC TAAGGCAGGA
AAACACCAGG AAGCGGTGGA GGCGCTCTTG AAAGGATGGG CGCTTTTACC CGTCGGGGGT
TATCAGCTAT CTGTACCTGC TGCGGTGTGG TTGGGAGAGA GTTACAAAGC GCTCTGTGAT
GCTAAAACCA GTAAGAAATG GTGGGAAGCG GCTGGTCAGG GATGTCAGGA ATTAAGGACT
TTTAACCCGG CTGCGGCGGA TTACTGGTTA GGGTTAGCTC TGGTAGGGTT GGGGGATAAG
TTGGGAGCAA TACAGGCATA TCAAAGCGCT TTGACTCAGC AGTTATTGTA TCCGGCTCGT
GGGGAAGTGG AGAAGATTTT GCAACGGCTC AAAGGTAAGA AGGGTAAGGG TTCTAGGGGA
TGA
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| Protein sequence | MNANLIVSEK LARQQQKLIT LSKYVEKYPQ GWKKRLELAN LLYEMGNWQQ AVTEYYQVIE
RQPQLINVRL QLGKILQLMG LKKEAREIYE QALLLSENDG TQHHIKGLIA LCTGESQEAI
TAFNLATSLE PKKVVHWLAL AQVHQGRESP LGTLSALEQV LTINPDDVMA LIYSYDALLE
VGDISAARGR LNRLIVIAGD DFRVLQRQIA QCCQMRLVSG EEGKQTKKMI TSLLRLTPDG
VGAYNSLAYY HILRGDWRQG VEVLAKFTAE HPQHPYGWYF YGRCLSDTGE YQKAALMMEK
AYHLYPDDCE IYRGLCEILP FVTSPPTPLH LPLPPPARRG ESGTSFIFGE GSKITLASIV
EEMLKRFPEL WSVWATAGRV LVEHFQEFER GCQVSQQGTE LQPQLADAWF RHGRVLAKAG
KHQEAVEALL KGWALLPVGG YQLSVPAAVW LGESYKALCD AKTSKKWWEA AGQGCQELRT
FNPAAADYWL GLALVGLGDK LGAIQAYQSA LTQQLLYPAR GEVEKILQRL KGKKGKGSRG
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