Gene PCC7424_4365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_4365 
Symbol 
ID7108443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp4841080 
End bp4841925 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content38% 
IMG OID643482585 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002379599 
Protein GI218441270 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAACA GTAACTCAAT TATACCAGCG ACCCCAAAGC AAGAACTTGT GTTCTCTTTA 
TCAGATGTAG AAATCGGAAA TGTATTGCCA AAATCAAGCC AGATCATAAC CGGAGATCAA
AAACCTGAGC GAGATTTTTG GCCAATATGG GAATCAGAGC GAGATTATTT TTATAAGCTT
TGCCTACGGT GGATGGGAGG GAATTCTCAT GATGCCGAAG ATGTCCTGAA TCAAGTAATG
CTAAAAGCCT GGAATAAGTG GGAAAAATCT GCCAACAAAA TTATCTATCC AAAAAGTTGG
TTGTCTCGAA TTATTTATAA CTTTTGTATG GATATACATC GAAAACGTAA ACGAGAAGCC
CAAAATATAG ATAATATTGA TGAGCTTCAA TTGGCAGATG ATACAGCATT TAGGTCTGAG
GTAGGCATTC CTGAAACTAA TATGTTGAAT CAGGAAATGC GAGCATATCT GGGGCACTTA
ATTGAATCAT TACCTAATAA ACTGCGTGTT CCTTTTATTT TATCCTGTTA CTATGATAAA
CCCTATCAAG ATGTCGCTAA ACAACTCGCC CTTTCTGAAG AAAATGCTCG TCAACGTATT
TACAAGGCAC GACGGATTTT AAAAAAGCAA TTAAAGAAGT ATCTTGCCGG GGAAGATAAC
ACTTCTCTAG ATCCCCTTTC ACCATTCTTA AAAAAGGATA TTCCTCTGGG AGAAAAGTTT
CAATTTGATG AAACCATACC CACAAAGAGC CAACAAGAAG AAATTAACTA TAAAGTAACA
GTAATATGTC TGGAAACACT GCCACATCCT TGGTACAGTT CAGCCAATTC TCTGGGGTGG
AGATGA
 
Protein sequence
MVNSNSIIPA TPKQELVFSL SDVEIGNVLP KSSQIITGDQ KPERDFWPIW ESERDYFYKL 
CLRWMGGNSH DAEDVLNQVM LKAWNKWEKS ANKIIYPKSW LSRIIYNFCM DIHRKRKREA
QNIDNIDELQ LADDTAFRSE VGIPETNMLN QEMRAYLGHL IESLPNKLRV PFILSCYYDK
PYQDVAKQLA LSEENARQRI YKARRILKKQ LKKYLAGEDN TSLDPLSPFL KKDIPLGEKF
QFDETIPTKS QQEEINYKVT VICLETLPHP WYSSANSLGW R