Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4188 |
Symbol | lipB |
ID | 7111526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 4638519 |
End bp | 4639160 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643482411 |
Product | lipoyltransferase |
Protein accession | YP_002379426 |
Protein GI | 218441097 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.0627971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAT GTTTATTAAA AAATTTGGGG TTAGTGTCTT ATGGCGTAGC TTGGTCTCAA CAGCGATCCC TGGTGCAAGA GAGACTGGAC AATCCTAATG TAGAAGATAT TCTTTTATTA TTAGAACATC CTCCCGTTTA TACGTTAGGA ACAGGAGCTA ATCTAAAATT TCTCAAATTT AACCCGGATG AGTCCCCTTG GGAAGTCCAC CGGGTTGAAC GGGGAGGAGA AGTAACTTAT CATTGTCCGG GGCAATTAGT GGGGTATCCT ATCCTCAATT TACGTTTTTA CCGACAAGAT TTACATTGGT ATTTACGACA GCTTGAGGAA GTGATTATTC AGGTTGTTGC TAATTATGGA CTCTTAGGAG AACGTCTTGA GGGGTTAACC GGAGTTTGGA TAGAAGGGTA TAAAGTTGCA GCGATCGGGA TTAAAGTCAG TCGTTGGATT ACGATGCACG GCTTTTCGTT GAATGTTTGT CCGGATTTAA CGGGGTTTGA GCGTATTGTT CCCTGTGGGA TCGAGAATAG ACCGGTAGGA ACGTTAGCTC AATTTCTGGG ACAGATTACC ACCGAACAAG TTCGTCAAGA TCTCAAAAAA GCCTTTTCCC AAGTTTTTGA GGTTGAGTTG ATCGAGGTTT AA
|
Protein sequence | MKKCLLKNLG LVSYGVAWSQ QRSLVQERLD NPNVEDILLL LEHPPVYTLG TGANLKFLKF NPDESPWEVH RVERGGEVTY HCPGQLVGYP ILNLRFYRQD LHWYLRQLEE VIIQVVANYG LLGERLEGLT GVWIEGYKVA AIGIKVSRWI TMHGFSLNVC PDLTGFERIV PCGIENRPVG TLAQFLGQIT TEQVRQDLKK AFSQVFEVEL IEV
|
| |