| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4183 |
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| Symbol | |
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| ID | 7111521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 4633461 |
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| End bp | 4634579 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643482406 |
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| Product | twitching motility protein |
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| Protein accession | YP_002379421 |
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| Protein GI | 218441092 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.212541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGTCG ATTTTTTAAT CGAAGATTTA ATGGAACAAC TCGTAGAAAT GGGGGGTTCT
GATATGCACA TTCAAGCGGG TGCGCCGATT TATTTTCGGA TTAGTGGTCG CTTAAATCCG
ATTGATGATG AAGTTCTTTC TCCTCAAGAT AGTCAGAAAT TAATTTTTAG TATGCTCAAC
AATACTCAAC GGAAAGAATT AGAGCAAAAC TGGGAATTAG ACTGTTCTTA TGGGGTTAAA
GGATTAGCTC GTTTTCGGGT TAATGTGTAT AAAGAGCGGG GATGTTATGC GGCTTGTTTA
AGAGCCTTAT CTTCTAAAAT TCCTAATTTT GAACAGTTGG CTTTACCGAA TATTGTCCGC
GAAATGGCAG AAAGACCGAG AGGAATGATT TTAGTAACGG GTCAAACTGG GTCAGGAAAA
ACTACCACGT TAGCGGCTAT TTTAGACTTA ATTAATCGGA CTCGTTCAGA ACATATTTTA
ACGGTAGAAG ATCCCATTGA ATATGTTTTT CCTAATGTTA AGAGTTTATT TCATCAACGG
CAAAAGGGAG AAGATACTAA AAGTTTTGCC AATGCTTTAA AGGCAGCCTT ACGGGAAGAT
CCGGATATTA TTCTCGTGGG GGAAATGCGG GATTTAGAAA CAATTTCTCT AGCTATTTCT
GCGGCAGAAA CAGGACACCT CGTTTTAGGA ACATTACACA CCAGTTCGGC GGCGGGGACT
ATTGACCGGA TTATTGATGT GTTTCCCGCT AACCAACAAG CTCAAATTAG AGCCATGTTA
TCTAACTCTT TATTAGCGGT ATTTAGTCAA TGTTTAGTGA AAAAGAAAAA CCCTAAACCG
GGGGAATTTG GACGAGCAAT GGCACAAGAA ATTATGATAG TTACTCCCGC TATTGCTAAC
TTAATTAGAG AAGCTAAAGC CGCTCAAATT TATTCAGCAA TTCAAACGGG TATGAAATTA
GGAATGCAAA CGATGGAACA AGCTTTAGCC AATTTAATCA TTTCTGGAAC AATTTCTCTT
GAAGAAGGGT TATCTAAAAG TAGTAAACCT GATGAATTAC AACGTCTTAT TGCTGGGGCA
CAATTTGGAA ATACTAACAA TAAAGCTAAA GCTCGTTAA
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| Protein sequence | MAVDFLIEDL MEQLVEMGGS DMHIQAGAPI YFRISGRLNP IDDEVLSPQD SQKLIFSMLN
NTQRKELEQN WELDCSYGVK GLARFRVNVY KERGCYAACL RALSSKIPNF EQLALPNIVR
EMAERPRGMI LVTGQTGSGK TTTLAAILDL INRTRSEHIL TVEDPIEYVF PNVKSLFHQR
QKGEDTKSFA NALKAALRED PDIILVGEMR DLETISLAIS AAETGHLVLG TLHTSSAAGT
IDRIIDVFPA NQQAQIRAML SNSLLAVFSQ CLVKKKNPKP GEFGRAMAQE IMIVTPAIAN
LIREAKAAQI YSAIQTGMKL GMQTMEQALA NLIISGTISL EEGLSKSSKP DELQRLIAGA
QFGNTNNKAK AR
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