| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4172 |
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| Symbol | |
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| ID | 7111510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 4620298 |
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| End bp | 4621008 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643482395 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_002379410 |
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| Protein GI | 218441081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCCTT TACGTGATGA AAATCCGACT GAATTAACTC CTTATGTCAC GATTGGTTTA
ATTATTGTTA ATGTTTTAGT TTTTATTAAT GAAATAAGTT TAAGTCCTCC CCAATTAGAG
CAATTTTTTC AACTGTTTGC GGTTATTCCG GAACAATTAA CGGGGAGTTT TTTTGGGGTT
GCTATTAATC AACCCATTCC TGAATGGCTG ACTCTATTTA CCTCACAATT TTTACACGCC
GGATTTTTGC ATATTATTGG TAATATGCTT TTTTTATGGA TTTTTGGCAA TAATGTAGAG
GACAAACTCG GTCATGTAAA ATATTTAATT TTTTATCTAA GTTGTGGGGT TTTAGCGTCT
TTAACTCAAT GGTATTTTTC TCCTTTTTCG AGTATACCTT CTTTAGGAGC TAGTGGAGCG
ATCGCCGGAG TAATGGGGGC TTATATTTTA AAATTTCCCC AAGCAGAAGT CATTACCTTA
ATTCCTCTGG GGTTTTTCTT TTGGACAGTG AGAATACCGG CGATTTTCTT TTTAGGGTTT
TGGTTTATAC AACAAGCATT TAATGGGTTT TCCAGTTTAA GAGTTCCGGC CAGTGTCGGG
ATGGAAAACG GGGGAATTGC TTATTGGGCC CATGCGGGGG GTTTTATATT TGGTGTTATT
TTAGGGCCTG TATTAGGATT GCTTTCAGAT TCAAAAAGAA AGACAGAATA A
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| Protein sequence | MVPLRDENPT ELTPYVTIGL IIVNVLVFIN EISLSPPQLE QFFQLFAVIP EQLTGSFFGV
AINQPIPEWL TLFTSQFLHA GFLHIIGNML FLWIFGNNVE DKLGHVKYLI FYLSCGVLAS
LTQWYFSPFS SIPSLGASGA IAGVMGAYIL KFPQAEVITL IPLGFFFWTV RIPAIFFLGF
WFIQQAFNGF SSLRVPASVG MENGGIAYWA HAGGFIFGVI LGPVLGLLSD SKRKTE
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