Gene PCC7424_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_4084 
Symbol 
ID7109003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp4524235 
End bp4526766 
Gene Length2532 bp 
Protein Length843 aa 
Translation table11 
GC content43% 
IMG OID643482309 
ProductTPR repeat-containing protein 
Protein accessionYP_002379325 
Protein GI218440996 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACGAG AAAAGGAACT GCACTTGCTG CATGAAGATT TAGGGAGAGG AGATTTTGTT 
GCGGTGACGG GAATGGGGGG AGTGGGTAAA ACTGAGTTGG TGACTCAGTA TGTTAAGCGG
TATGGGGAAG CTTACGGGGG GATAACTTGG TTTAATGATA GGGAAAGGGG TTTGGCGGCA
GAAGTTTTCA AGTTTTTTGT TTTACAGTTA AATTATGAGA TTCCCCAAGA GTTAGGGGGA
CAACGGTTAA GTCTTAAACA ACAATTAGAG TGGTGTTGGA GTAATTATCC GGCTTGTGAG
TTGCCTATTT TACTGGTTTT TGATGATGTT ACTCATTTAG ATAATTTTCG GGAGGTTGTT
CCTAGTGATA ACCGTTTTCG AGTTTTGGTG ACGACTCGAC TACAATATCT AGACCCTAAT
TTTATTAGTG AGGTGGGTTT AGATGTTCTT TCCCCAGAAA ATGAACCGGG TAAGGCGTTA
GAACTGTTAG AAAGTTTGTT AGGAACGAAA GATAAGCGCG TCCAAAGAAA ACCCCAAGCG
GCAGCAAATA TATGTCAATG TTTGGAGTTT TTGCCGTTGG GGATAATTTT AGTCGGGGGG
TATTTGGTTA ATGAGCCGGA TTTGTCTTTA GAGAGAATGT TACAGCGCTT GCAGGAGAAA
AAGTTAGCAG AGGAAGCGCT ACAGCAACGG GAAAGTCTTA ATAAATATGA AAGGGGAGTT
AGGGCGGCTT TTGCGTTAAC TTGGGAAGAA CTTAATCCTT TGTCTCAACA AGTAGGAATG
TTCCTCAGTT TATTCTCTCC TAAGTTGATT CATTGGGATT TGGTGGTAGG GGTTGTGTGT
GACCTCTCCC CTGACCCCTC TCCTACTATG AGAGGGGAGA ATATTGACCT CTCCCCCAAC
CCCTCTCCTA CTATGAGAGG GGAGAATATT GATATTGTTC CCCCTTCCCT TGTAGGGAAG
GGGGTTAGGG GGTTAGGTCT TAATTGGTCG GAGGAGAAGT TAAACGAGGG GAAAAAGCAA
CTCTATAAAC GAAATTTGCT GCAACGGGAA GAAGAGAGAG AGGGATGTTA TAAAATTCAT
GCTTTAGTAA GGTGGTTTTT ACAGGAAAGG TTAGAGGAGT CAGGGGAGAT AAAGGGAGTT
TTAAAACAAA CTTTCGCCAC CGCGATGATA ACTAAGGCTA AAATTATTCC TAAGCAACCC
AGTGTTACAG ATATTGAAAA TGTTAAAGAT TTTATTCCCC ATATAGAAGC ATTGGCAGAG
AGTTTAATTG AAGAAGCAAA GGACAAAAGA CAGGGAAAGA TCATTACCTC AGCATTCTTG
TCTGATGAGG ATATTATCCG GCCTTTTGTG GGGGTAGGAT GGTTTTATCA AGGGCAGGGG
TTATATTTTT TAGCAGAACC TTGGTTAAAG CAATATGTAG ATGTGCTTAA AAGTTACTTT
GGAGAAGAAC ATCCCGATGT AGCAACCAGT TTGAACAATT TAGCCGTACT CTACCATTAC
CAAGGGCGCT ACACTGAAGC CGAACCCCTG TACCTCCAAG CGTTGGAGAT GAGAAAGCAA
CTGTTAGGGC AATCTCATCC TGATGTGGCA ACCAGTTTGA ACAATTTAGC CATTCTCTAC
TATTCAATGG GGCGCTACGA AAAAGCCGAA CCCCTATACC TCGAAGCTTT GGAGATGTAT
AAGCAACTGT TGGGGCAATC TCATCCTGAT GTGGCAACCA GTTTGAACAA TTTAGCCATT
CTCTACTATT CAATGGGGCG CTACGAAAAA GCCGAACCCC TATACCTCGA AGCTTTGGAG
ATGTATAAGC AACTGTTGGG GCAATCTCAT CCTGATGTGG CAACCAGTTT GAACAATTTA
GCCATTCTCT ACTATTCAAT GGGGCGCTAC GAAAAAGCCG AACCCCTATA CCTCGAAGCT
TTGGAGATGT ATAAGCAACT GTTGGGGCAA TCTCATCCTG ATGTGGCAAC CAGTTTGAAC
AATTTAGCCA TTCTCTACTA TTCAATGAGG CGCTACAAAA AAGCTGAACC CCTATACCTC
GAAGCTTGGG AGATGTATAA GCAACTGTTG GGGCAATCTC ATCCTCTTGT CGCAACGAGC
TTGAACAATT TAGCCCTTCT CTACTCTTCA ATGGGGCACT ACGACAAAGC TGAACCTCTG
TTGCTCGAAG CTTTGGAGAT GAGTAAGCAA CTGTTGGGGC AATCTCATCC TGATGTGGCA
ACCAGTTTGA ACAATTTAGC CCTTCTCTAC TCTTCAATGG GGCGCTACGA AAAAGCCGAA
CCTCTCTACC TCGAAGCTTT GGAGATATGT GAACGAGTCT TAGGGAATAA TCATCCTAAT
ACGGTGGCAA TTAGAGAAAA TCTTGACCTT ATGCAACAGG AACGTACTTC CCTTGACATC
TGGAGTCATC GCTTGGGTTA CGTTGTTGGA ATTTTGTTAG GAATAGTGAT ATTACCTGTT
GTAATCTTGT TAGTACCCTT TTATGTCCTG TGGTTGCTCT TTAAGCGCTT GTTTACTTTC
CTGTTCCGTT AA
 
Protein sequence
MGREKELHLL HEDLGRGDFV AVTGMGGVGK TELVTQYVKR YGEAYGGITW FNDRERGLAA 
EVFKFFVLQL NYEIPQELGG QRLSLKQQLE WCWSNYPACE LPILLVFDDV THLDNFREVV
PSDNRFRVLV TTRLQYLDPN FISEVGLDVL SPENEPGKAL ELLESLLGTK DKRVQRKPQA
AANICQCLEF LPLGIILVGG YLVNEPDLSL ERMLQRLQEK KLAEEALQQR ESLNKYERGV
RAAFALTWEE LNPLSQQVGM FLSLFSPKLI HWDLVVGVVC DLSPDPSPTM RGENIDLSPN
PSPTMRGENI DIVPPSLVGK GVRGLGLNWS EEKLNEGKKQ LYKRNLLQRE EEREGCYKIH
ALVRWFLQER LEESGEIKGV LKQTFATAMI TKAKIIPKQP SVTDIENVKD FIPHIEALAE
SLIEEAKDKR QGKIITSAFL SDEDIIRPFV GVGWFYQGQG LYFLAEPWLK QYVDVLKSYF
GEEHPDVATS LNNLAVLYHY QGRYTEAEPL YLQALEMRKQ LLGQSHPDVA TSLNNLAILY
YSMGRYEKAE PLYLEALEMY KQLLGQSHPD VATSLNNLAI LYYSMGRYEK AEPLYLEALE
MYKQLLGQSH PDVATSLNNL AILYYSMGRY EKAEPLYLEA LEMYKQLLGQ SHPDVATSLN
NLAILYYSMR RYKKAEPLYL EAWEMYKQLL GQSHPLVATS LNNLALLYSS MGHYDKAEPL
LLEALEMSKQ LLGQSHPDVA TSLNNLALLY SSMGRYEKAE PLYLEALEIC ERVLGNNHPN
TVAIRENLDL MQQERTSLDI WSHRLGYVVG ILLGIVILPV VILLVPFYVL WLLFKRLFTF
LFR