Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4084 |
Symbol | |
ID | 7109003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 4524235 |
End bp | 4526766 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643482309 |
Product | TPR repeat-containing protein |
Protein accession | YP_002379325 |
Protein GI | 218440996 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGACGAG AAAAGGAACT GCACTTGCTG CATGAAGATT TAGGGAGAGG AGATTTTGTT GCGGTGACGG GAATGGGGGG AGTGGGTAAA ACTGAGTTGG TGACTCAGTA TGTTAAGCGG TATGGGGAAG CTTACGGGGG GATAACTTGG TTTAATGATA GGGAAAGGGG TTTGGCGGCA GAAGTTTTCA AGTTTTTTGT TTTACAGTTA AATTATGAGA TTCCCCAAGA GTTAGGGGGA CAACGGTTAA GTCTTAAACA ACAATTAGAG TGGTGTTGGA GTAATTATCC GGCTTGTGAG TTGCCTATTT TACTGGTTTT TGATGATGTT ACTCATTTAG ATAATTTTCG GGAGGTTGTT CCTAGTGATA ACCGTTTTCG AGTTTTGGTG ACGACTCGAC TACAATATCT AGACCCTAAT TTTATTAGTG AGGTGGGTTT AGATGTTCTT TCCCCAGAAA ATGAACCGGG TAAGGCGTTA GAACTGTTAG AAAGTTTGTT AGGAACGAAA GATAAGCGCG TCCAAAGAAA ACCCCAAGCG GCAGCAAATA TATGTCAATG TTTGGAGTTT TTGCCGTTGG GGATAATTTT AGTCGGGGGG TATTTGGTTA ATGAGCCGGA TTTGTCTTTA GAGAGAATGT TACAGCGCTT GCAGGAGAAA AAGTTAGCAG AGGAAGCGCT ACAGCAACGG GAAAGTCTTA ATAAATATGA AAGGGGAGTT AGGGCGGCTT TTGCGTTAAC TTGGGAAGAA CTTAATCCTT TGTCTCAACA AGTAGGAATG TTCCTCAGTT TATTCTCTCC TAAGTTGATT CATTGGGATT TGGTGGTAGG GGTTGTGTGT GACCTCTCCC CTGACCCCTC TCCTACTATG AGAGGGGAGA ATATTGACCT CTCCCCCAAC CCCTCTCCTA CTATGAGAGG GGAGAATATT GATATTGTTC CCCCTTCCCT TGTAGGGAAG GGGGTTAGGG GGTTAGGTCT TAATTGGTCG GAGGAGAAGT TAAACGAGGG GAAAAAGCAA CTCTATAAAC GAAATTTGCT GCAACGGGAA GAAGAGAGAG AGGGATGTTA TAAAATTCAT GCTTTAGTAA GGTGGTTTTT ACAGGAAAGG TTAGAGGAGT CAGGGGAGAT AAAGGGAGTT TTAAAACAAA CTTTCGCCAC CGCGATGATA ACTAAGGCTA AAATTATTCC TAAGCAACCC AGTGTTACAG ATATTGAAAA TGTTAAAGAT TTTATTCCCC ATATAGAAGC ATTGGCAGAG AGTTTAATTG AAGAAGCAAA GGACAAAAGA CAGGGAAAGA TCATTACCTC AGCATTCTTG TCTGATGAGG ATATTATCCG GCCTTTTGTG GGGGTAGGAT GGTTTTATCA AGGGCAGGGG TTATATTTTT TAGCAGAACC TTGGTTAAAG CAATATGTAG ATGTGCTTAA AAGTTACTTT GGAGAAGAAC ATCCCGATGT AGCAACCAGT TTGAACAATT TAGCCGTACT CTACCATTAC CAAGGGCGCT ACACTGAAGC CGAACCCCTG TACCTCCAAG CGTTGGAGAT GAGAAAGCAA CTGTTAGGGC AATCTCATCC TGATGTGGCA ACCAGTTTGA ACAATTTAGC CATTCTCTAC TATTCAATGG GGCGCTACGA AAAAGCCGAA CCCCTATACC TCGAAGCTTT GGAGATGTAT AAGCAACTGT TGGGGCAATC TCATCCTGAT GTGGCAACCA GTTTGAACAA TTTAGCCATT CTCTACTATT CAATGGGGCG CTACGAAAAA GCCGAACCCC TATACCTCGA AGCTTTGGAG ATGTATAAGC AACTGTTGGG GCAATCTCAT CCTGATGTGG CAACCAGTTT GAACAATTTA GCCATTCTCT ACTATTCAAT GGGGCGCTAC GAAAAAGCCG AACCCCTATA CCTCGAAGCT TTGGAGATGT ATAAGCAACT GTTGGGGCAA TCTCATCCTG ATGTGGCAAC CAGTTTGAAC AATTTAGCCA TTCTCTACTA TTCAATGAGG CGCTACAAAA AAGCTGAACC CCTATACCTC GAAGCTTGGG AGATGTATAA GCAACTGTTG GGGCAATCTC ATCCTCTTGT CGCAACGAGC TTGAACAATT TAGCCCTTCT CTACTCTTCA ATGGGGCACT ACGACAAAGC TGAACCTCTG TTGCTCGAAG CTTTGGAGAT GAGTAAGCAA CTGTTGGGGC AATCTCATCC TGATGTGGCA ACCAGTTTGA ACAATTTAGC CCTTCTCTAC TCTTCAATGG GGCGCTACGA AAAAGCCGAA CCTCTCTACC TCGAAGCTTT GGAGATATGT GAACGAGTCT TAGGGAATAA TCATCCTAAT ACGGTGGCAA TTAGAGAAAA TCTTGACCTT ATGCAACAGG AACGTACTTC CCTTGACATC TGGAGTCATC GCTTGGGTTA CGTTGTTGGA ATTTTGTTAG GAATAGTGAT ATTACCTGTT GTAATCTTGT TAGTACCCTT TTATGTCCTG TGGTTGCTCT TTAAGCGCTT GTTTACTTTC CTGTTCCGTT AA
|
Protein sequence | MGREKELHLL HEDLGRGDFV AVTGMGGVGK TELVTQYVKR YGEAYGGITW FNDRERGLAA EVFKFFVLQL NYEIPQELGG QRLSLKQQLE WCWSNYPACE LPILLVFDDV THLDNFREVV PSDNRFRVLV TTRLQYLDPN FISEVGLDVL SPENEPGKAL ELLESLLGTK DKRVQRKPQA AANICQCLEF LPLGIILVGG YLVNEPDLSL ERMLQRLQEK KLAEEALQQR ESLNKYERGV RAAFALTWEE LNPLSQQVGM FLSLFSPKLI HWDLVVGVVC DLSPDPSPTM RGENIDLSPN PSPTMRGENI DIVPPSLVGK GVRGLGLNWS EEKLNEGKKQ LYKRNLLQRE EEREGCYKIH ALVRWFLQER LEESGEIKGV LKQTFATAMI TKAKIIPKQP SVTDIENVKD FIPHIEALAE SLIEEAKDKR QGKIITSAFL SDEDIIRPFV GVGWFYQGQG LYFLAEPWLK QYVDVLKSYF GEEHPDVATS LNNLAVLYHY QGRYTEAEPL YLQALEMRKQ LLGQSHPDVA TSLNNLAILY YSMGRYEKAE PLYLEALEMY KQLLGQSHPD VATSLNNLAI LYYSMGRYEK AEPLYLEALE MYKQLLGQSH PDVATSLNNL AILYYSMGRY EKAEPLYLEA LEMYKQLLGQ SHPDVATSLN NLAILYYSMR RYKKAEPLYL EAWEMYKQLL GQSHPLVATS LNNLALLYSS MGHYDKAEPL LLEALEMSKQ LLGQSHPDVA TSLNNLALLY SSMGRYEKAE PLYLEALEIC ERVLGNNHPN TVAIRENLDL MQQERTSLDI WSHRLGYVVG ILLGIVILPV VILLVPFYVL WLLFKRLFTF LFR
|
| |