| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4051 |
|---|
| Symbol | |
|---|
| ID | 7107297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 4489157 |
|---|
| End bp | 4489855 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643482276 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_002379293 |
|---|
| Protein GI | 218440964 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAATG ACCGGGTTAT TGTTCCTTTG GATGTTCCTA CTCTAGAAGA GGCGATCGCT
TTATTGGATC TACTCCCAAG GGTCAGCTTT TGGAAAGTGG GGCTAGAATT ATTTGTTAGT
GCCGGGCCAA GTATTCTAGA AATCCTCAAA GAACGAGAAA AACGGATTTT TTTAGATTTA
AAATTCCATG ATATCCCCAA TACGGTGGCC GGTGCTTGCC GGAGTGCGAC TAAATACGGG
GTTGATTTAC TCACGCTTCA TGCTACGGCA GGACGAAAAG CCCTCTCTCA GGCAGTTGAA
GCCATTTCTA CTGGGGATAA ACCCCCTAAA TTACTTGCCA TTTCCTTGCT AACCAGTATA
AACTCACGAG AGTTAGCCTT TGATTTGAAA ATTCCTCTAG AACTTCCTGA GTATGCTTTA
CAAATGGCCC TATTAGCTCA GGAAACGGGG ATAGATGGGG CGGTTTGTTC CCCTCAAGAG
GTTAGCCAAC TCAGACAAGT TTGTGGCAGT GATTTTCTGC TGGTTTGTCC TGGGGTGCGT
CCAACTTGGG CCGAAGCCGG AGATCAACGT CGGGTGATGA CTCCTGTCTC TGCAATTAAA
GCCGGAGCGG ATTATTTGGT GATCGGTCGT CCAATTACAA CAGCGTCAAA TCCTGTAGAA
GCATGGGAAA AAGTGTGTCA AGAATTAGCA GAGGTCTAA
|
|---|
| Protein sequence | MINDRVIVPL DVPTLEEAIA LLDLLPRVSF WKVGLELFVS AGPSILEILK EREKRIFLDL
KFHDIPNTVA GACRSATKYG VDLLTLHATA GRKALSQAVE AISTGDKPPK LLAISLLTSI
NSRELAFDLK IPLELPEYAL QMALLAQETG IDGAVCSPQE VSQLRQVCGS DFLLVCPGVR
PTWAEAGDQR RVMTPVSAIK AGADYLVIGR PITTASNPVE AWEKVCQELA EV
|
|---|
| |