| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4008 |
|---|
| Symbol | tpiA |
|---|
| ID | 7107253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 4441743 |
|---|
| End bp | 4442468 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643482232 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_002379250 |
|---|
| Protein GI | 218440921 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.0608629 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGAAAA TTATCATTGC TGGTAACTGG AAAATGTACA AGACTCAAGC AGAAGCTCTG
GAGTTTGTGC AAGTATTTAA ATCAAAAATA GAGGATACAG ACGAATCTAG AGAAATAGTC
TTATGCGCCC CCTTTACTGA TTTAGGAGCA ATGTCTAAAA ATTTACATGG GAGTCGCATT
AAATTAGGGG CGCAAAATGT CCACTGGGAA GAAGCCGGTG CCTACACAGG TGAAATTTCC
GGGGCAATGC TAACCGAAAT CGGGGTGAGT TATGTCATTG TGGGTCATAG TGAACGCCGT
CAATATTTCG GAGACACCGA TGAAACCGTC AATTTAAGAG TCCTTGCGGC TCAAAAATAC
GGGTTAATTC CTATCCTCTG TGTTGGGGAA TCTAAATCTC AACGGGATGC AGGAGAAACG
GAAAAGATCA TCATTAATCA ATTAAAACGG GATTTGGTTG ATGTAGATCA AAATAAGTTA
GTCATTGCTT ATGAACCCAT CTGGGCCATT GGGACTGGTG ACACCTGTGA ATCTTCAGAA
GCTAACCGAG TTATCGGCAT CATTCGAGAA CAATTAACCA ATAAAAATGT CTCGATTCAA
TATGGAGGTT CTGTTAAACC CGGTAATATT GATGAAATTA TGAAACAATC AGAAATTGAT
GGTGCTTTAG TCGGCGGTGC TAGTTTAAAT CCGGCAGATT TCGCCCAGAT TGTTAATTAT
AAATAG
|
|---|
| Protein sequence | MRKIIIAGNW KMYKTQAEAL EFVQVFKSKI EDTDESREIV LCAPFTDLGA MSKNLHGSRI
KLGAQNVHWE EAGAYTGEIS GAMLTEIGVS YVIVGHSERR QYFGDTDETV NLRVLAAQKY
GLIPILCVGE SKSQRDAGET EKIIINQLKR DLVDVDQNKL VIAYEPIWAI GTGDTCESSE
ANRVIGIIRE QLTNKNVSIQ YGGSVKPGNI DEIMKQSEID GALVGGASLN PADFAQIVNY
K
|
|---|
| |