Gene PCC7424_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3996 
Symbol 
ID7107241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp4429184 
End bp4429705 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content39% 
IMG OID643482220 
Productphotosystem I assembly protein Ycf3 
Protein accessionYP_002379238 
Protein GI218440909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00079078 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCAGAA CTCAACGGAA CGATAATTTT ATTGACAAAA CCTTTACGGT TATGGCCGAT 
ATCATCCTCA AAGTAGTCCC TTTTAATAAG AAAGCTAAAG AGGCTTTTGT TTATTATCGG 
GATGGAATGT CTGCCCAAGC TGACGGAGAA TATAAGGAAG CTTTAGATAA TTATTATGAA 
GCCCTGAAAT TAGAAGATGA TGCCAACGAT CGCAGTTATA TTCTCTATAA TATCGGGATT 
ATTCATGGCA GTAATGGGGA ACATGAAAGA GCTTTAGAGT ATTATCATGA AGCGATCGAG 
CTTAATCCTA ATTTACCCTC AGCCCTGAAT AATATTGCGG TAATTTACCA TTATCAGGGA 
GAACGAGCCA AAGAAGAAGG CAGAGAAGAT GAATCTGAGG CTTTATTTGA TAAAGCGGCG 
GAATATTGGA AACAGGCCAT CCGGCTTGCC CCTAATAATT ACATTGAAGC CCAAAACTGG 
CTCAAAGTGA CCGGACGTTC TGAAATGGAT GTCTTTTTCT AA
 
Protein sequence
MPRTQRNDNF IDKTFTVMAD IILKVVPFNK KAKEAFVYYR DGMSAQADGE YKEALDNYYE 
ALKLEDDAND RSYILYNIGI IHGSNGEHER ALEYYHEAIE LNPNLPSALN NIAVIYHYQG 
ERAKEEGRED ESEALFDKAA EYWKQAIRLA PNNYIEAQNW LKVTGRSEMD VFF