Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3994 |
Symbol | |
ID | 7107239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 4426373 |
End bp | 4428577 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643482218 |
Product | RDD domain containing protein |
Protein accession | YP_002379236 |
Protein GI | 218440907 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00412081 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAAGCC CTACGATTAA AAGAGGCAAA AATCGCTCAT CTGGTCAAAC TTTTTCGGTG ACAACAGTGT CCCTTCTTCC CCGACGCTGT GCCGCTTGGA TCATGGAAGT TTACCTGGTG GCTATGAGTG GTATCGTTCC CTATAGCATT GGCGCTTATA TCGAATCTCA TTCCCACAGC CAAAAAGTTC CTCTTCATCC GGTTTTAGCG TCTTTAGAAG AAGGAATTGC CCAAACTCTT GCTCTCCCTC AGTCCCAAAC CCAACCGCGC CAAGTCCCCC CTCTAACTAA TCTATTTTGG GGGTTAGCAT TAGGCACTCC GATCGCTGTA ATCGGATGGC AACTCTATAT TTTAGGGAGA ACGGGAAGAA CGTTACCGAA ACGATGGTTA GGAGTCAAAG TCGTCACCAC TGGAGGGCGA TCGCCTTCCG GGTTACAAAT TCTGCTACGA GAAGGGGTAG GGAAATGGGG TTTGCCTCTG AGTGTCGCCT ATGTTCTTTG GCGGTATTCC CCCGTTTTTC CCAGTGGAGG AGGATTAATC CTTTTCAGTG GGGTGATGGT TCTTTTAGAG GGAGGATTAT TGTTATTATC CCCTCGTCGT CGTTGTTTTC ATGACCAAAT TGCCAACACA GTCGTGATAG ACACCAAACA GGGTTATAAA AAGCGTTCCT CTCGTCCCTC ATCTCCCTCA GTCACCGTAG AAGTTCCCCT TAATTCCCCC AATTATTCCC AAAAACAGCG CCGAAATCGA TCGCCTGAAC CGGTTAGAAC CCTTGTTTTA AGACCGACAA TCGAAAAACA ATCCCCCAAT CTTTGGTTAT GGATGCGCCG CCATCCGGGG ACAACTTTGT TAATCATTAG TTTGGCCGGA ATAACCTTAA TTTTGGCGAC TTTTGTAGGA ACTCAAGTTT ATATTGAAAA GAAAGCGGAT CAACGACAAT CAGAACAACA AAAAAATCAA GAATATCAGT TTTTAGTCAC TCAATTGGCG GCTACTTCTG CCGATCCTCT ACAAGAACGA AAAGCCGTTA TTTTAGCTTT AGCCAGATTA GAAGATCCCC GTTCTATTAC TTTATTAGTC GATTTGTTAG GACAGGAAAC TAATTTATCT ATTATTACAA CTTTAGAACA AGCGTTTGCC AGTGTGGGGA CGAAAGCGTT ACCCGCCCTC AGACAACAAA ATCAATCTTT ATCTCAACAG TTACAGGCGA TCGAAGATCA AACCTCTTCA GATTATCAGT TAACCGCTTG GCGTTTAAGG GCAACTAAAC AAGCGATCGC TAAAATTTTA GTTCTGCATA ATAATCAACT GAGTCAGGTT AATTTAAGTC GAGTTGATCT CAATAAAGAC ACCATAGAAA TAGCTCCCTT TACCTTAATA GCGGAGGAAT TGGATTTATC CGGCATCAAT TTTGAGAATG CCCAATTATC ACAAGCTCGT TTAAAGGGTA GCGTTTTTGC GAGTGCCGGT CAAGATAAAC ATGAGGATAC CTTTGATGAT TTAATTGCCA ATTTTAAAGG GGCTAATTTA ACTCAAGCTG ACTTAAGTGA AGCGGTTTTA CCTTGTGTTT CTCTAGTCGG GGCTAATTTA CAACAGACTA ATTTAAAAAG GTCTAATTTA AAGCAAGCCA ACCTCCAAAA AGCCAATCTT AGCAGTGTCC AATTACTTCA AGCTAATTTG CAGCAAGCTA ACTTAAAAGC TGCCAGTTTA ACCGGGGCTG ATTTAACTCA AGCTCAGTTT AATCAAGCTA ATTTGGAACA GGCTAATTTA GGGCAACTTA ACGCAGTAGG AGCGAATTTT TCGGAAGCTA ATTTAGCTAA ATCTAACTGG CAAGATTCGG ATTTATCAGG AGTTAATTTT ACGTCGGCTA ATTTAGAACA AGCGGACTTG AGTTCTACGG TTTTAAAAGG AGTTAATTTC CGTAACGCTC AATTAAATAA TGCCAATTTA ACCGATGCTA ATCTTTCTCA AGCTGACTTA CGTTCGGCAA ATTTAGCGGG GGCAAATTTT CACGGTGTTA TTTTTTCTAA AGTTCAATTC ACTAATACAA ACGGTTTTTT AAAAACACCC CCTAATCATC AATCTGAAGC CATTATAAAA GGTGTAGATT TTAGTGAGGT CAAAAATTTA AGCCCAACTC AAATCGATTT TATTTGTCAA AAAGGAGGCA TTCATCCTCA ATGTATAGTA GAAGGGGGAA GATAA
|
Protein sequence | MASPTIKRGK NRSSGQTFSV TTVSLLPRRC AAWIMEVYLV AMSGIVPYSI GAYIESHSHS QKVPLHPVLA SLEEGIAQTL ALPQSQTQPR QVPPLTNLFW GLALGTPIAV IGWQLYILGR TGRTLPKRWL GVKVVTTGGR SPSGLQILLR EGVGKWGLPL SVAYVLWRYS PVFPSGGGLI LFSGVMVLLE GGLLLLSPRR RCFHDQIANT VVIDTKQGYK KRSSRPSSPS VTVEVPLNSP NYSQKQRRNR SPEPVRTLVL RPTIEKQSPN LWLWMRRHPG TTLLIISLAG ITLILATFVG TQVYIEKKAD QRQSEQQKNQ EYQFLVTQLA ATSADPLQER KAVILALARL EDPRSITLLV DLLGQETNLS IITTLEQAFA SVGTKALPAL RQQNQSLSQQ LQAIEDQTSS DYQLTAWRLR ATKQAIAKIL VLHNNQLSQV NLSRVDLNKD TIEIAPFTLI AEELDLSGIN FENAQLSQAR LKGSVFASAG QDKHEDTFDD LIANFKGANL TQADLSEAVL PCVSLVGANL QQTNLKRSNL KQANLQKANL SSVQLLQANL QQANLKAASL TGADLTQAQF NQANLEQANL GQLNAVGANF SEANLAKSNW QDSDLSGVNF TSANLEQADL SSTVLKGVNF RNAQLNNANL TDANLSQADL RSANLAGANF HGVIFSKVQF TNTNGFLKTP PNHQSEAIIK GVDFSEVKNL SPTQIDFICQ KGGIHPQCIV EGGR
|
| |