Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3948 |
Symbol | |
ID | 7107354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 4379731 |
End bp | 4380273 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643482172 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002379190 |
Protein GI | 218440861 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAGAG AAAAAGCAAT TAGTCAAATA ATCCCCGTTT TTCAGCGTTA TGGATATGAA GGAGCGACCT TATCTCGGTT ATCACAAGCG ACAGGGTTAG GGCGATCGAG TCTTTATCAT CACTTTCGGG GAGGGAAAGA AGAAATGGCG ATCGCTGTAT TAGAGTATGT TGCTCAGTGG TTTGAGGAGA TGATCCTATC TGCTTTACGG ACTTGTGATG AACCCCTGGA ACGGTTGAGA ATAATGTGTC AAAATTTGGA TAAATTTTAT CATCATGGGC GAGAAAGCTG TTTACTGAAT GTGATTACTT TTGGGGAGGG AAATGATTTA TTTCATCAAC AGGTTCAGCA AATGCTCCTA ATTTGGATTG ATCAATTGGC ACAAGTGTTA ATAGAAGGAG GAATTAAACC CGAAGAGGCT AAAAATAGGG CACAAGAGGC AATTATATTA ATTCAAGGGG CGTTAGTATT AGCTAGGGGA CTAGATAATA CAAGTCCTTT TGAGAGAATA ATAGAGTCGC TACCAGAGCG ATTATTAAAT TAA
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Protein sequence | MSREKAISQI IPVFQRYGYE GATLSRLSQA TGLGRSSLYH HFRGGKEEMA IAVLEYVAQW FEEMILSALR TCDEPLERLR IMCQNLDKFY HHGRESCLLN VITFGEGNDL FHQQVQQMLL IWIDQLAQVL IEGGIKPEEA KNRAQEAIIL IQGALVLARG LDNTSPFERI IESLPERLLN
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