Gene PCC7424_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3948 
Symbol 
ID7107354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp4379731 
End bp4380273 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content39% 
IMG OID643482172 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002379190 
Protein GI218440861 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGAG AAAAAGCAAT TAGTCAAATA ATCCCCGTTT TTCAGCGTTA TGGATATGAA 
GGAGCGACCT TATCTCGGTT ATCACAAGCG ACAGGGTTAG GGCGATCGAG TCTTTATCAT
CACTTTCGGG GAGGGAAAGA AGAAATGGCG ATCGCTGTAT TAGAGTATGT TGCTCAGTGG
TTTGAGGAGA TGATCCTATC TGCTTTACGG ACTTGTGATG AACCCCTGGA ACGGTTGAGA
ATAATGTGTC AAAATTTGGA TAAATTTTAT CATCATGGGC GAGAAAGCTG TTTACTGAAT
GTGATTACTT TTGGGGAGGG AAATGATTTA TTTCATCAAC AGGTTCAGCA AATGCTCCTA
ATTTGGATTG ATCAATTGGC ACAAGTGTTA ATAGAAGGAG GAATTAAACC CGAAGAGGCT
AAAAATAGGG CACAAGAGGC AATTATATTA ATTCAAGGGG CGTTAGTATT AGCTAGGGGA
CTAGATAATA CAAGTCCTTT TGAGAGAATA ATAGAGTCGC TACCAGAGCG ATTATTAAAT
TAA
 
Protein sequence
MSREKAISQI IPVFQRYGYE GATLSRLSQA TGLGRSSLYH HFRGGKEEMA IAVLEYVAQW 
FEEMILSALR TCDEPLERLR IMCQNLDKFY HHGRESCLLN VITFGEGNDL FHQQVQQMLL
IWIDQLAQVL IEGGIKPEEA KNRAQEAIIL IQGALVLARG LDNTSPFERI IESLPERLLN