| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3928 |
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| Symbol | |
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| ID | 7107333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 4363227 |
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| End bp | 4364861 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643482153 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002379172 |
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| Protein GI | 218440843 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATGC AAAATATTTG GCACAAAAAT GCGATTATTT ATTCCTTAGA TGTTGAAACA
TTTATGGATT CTAATGGAGA TGGCGTAGGA GATTTCCAAG GATTAATTGA GCGTTTAGAT
TATTTATCTG GATTGGGAAT TAATTGTTTA TGGCTTCTCC CCTTTTATCC TTCTCCAAAT
CGAGATAATG GCTATGATGT AATGGATTAT TACAATGTTG ATCCGCGTTT GGGAACTTTG
GGAGATTTTG TTGAATTTAT GGATCGCGCC AGAGAACAAG GGATTCATGT TTTAATAGAT
TTAGTTGTCA ATCACACTTC TATTGAGCAT CCCTGGTTTC AAGCCGCACG AACCGATAAA
AACTCTAAAT ATCGTCATTA CTATGTGTGG TCAGAAAATC CTCCTCAAGA TGATGTAGAA
GAAATTGTTT TTCCCCATGC AGAAGATAGT ATTTGGGAGT ACGATCAACA GGCAGAAGCT
TATTATTTAC ACCATTTCTA TAAAGAACAG CCAGATTTAA ATATTGCTAA TTCTGAAGTT
CGGGAAGAAA TTCGCAAAAT TATCAATTTT TGGCTGCAAT TAGGGGTATC AGGTTTTCGA
GTTGATGCTG TTCCCTATTT AATTAAAGAA ATTGGGGTTC AAGCTGAACG TCATGAACTC
GAAAGTTTCT TGAGCGAAAT GCGAGAATTT CTCTCTTTGC GTCGTGCCGA TGCAGTGTTA
TTAGCAGAAG CTAATGTATC GCCGGATTTG ACTTGCGTTT ATTTCGGACA AGGCGATCGC
ATGAATATGC TTTTTAATTT TTACTTAAAT CAACAGATGT TCCTGGCACT TGCTCGACAA
GAAGCCAATC CGATTATAGA TGCCCTCAAA AGTTTACCAA AAATTCCGAA ACAAGCTCAA
TGGCTTAATT TTGTCCGTCA TCATGACGAA CTTAATCTTA ATCAACTTGA AAACACACAA
CGAGAAGAAA TTTTTCAAGT CTTTGCTCCT GAAGAAGCGA TGCAAATTTA TAAAGGACGA
GGCATTAGGC GGCGCTTACC TCCCATGTTC GGCGGAGATC GACGACGCAT AGAACTTACT
TACAGTTTGC TATTTTCCCT ACCTGGAATT CCTTTACTGC GTTATGGGGA TGAAATAGGA
ATGGGTGACG ATCTTTCTTT ATCAGATAGA GACAGTGTTC GGACTCCTAT GCAATGGTCT
AGCGGGCAAA ACGGTGGGTT TTCAACGTCC GATCCTGAAA AATTGACTCA ACCAATGATT
TCTCAAGGAG AATATAGCTA TAAGTCTGTT AATGTGGCTG CAAGTCAGCG AGATCCTAAC
TCTTTATTAA ATTGGATGGA TCGCCTCATT CGCATTAGAA AACAATGTTC TGAGTTGGGA
TGGGGTAATT GGCAAATTTT AGACACTGGA GAACCTTGTG TTTTTGCCCA TTCTTGTGAG
TGGAATAATA AAACTGTGAT TGCGGTTCAC AATTTAGCGG ATAAATCTTG TTCGATCGCT
CTGAAGTTAG ATGGTTCTTA TTATTTAGAT GACTTATTTG GGGATCATCA ATATGAAGTA
CCAGGAGAAT CCCACACTAT TTCTTTAGAA GCTTATGGAT ATCGCTGGTT TCGTCTGAAT
CCCATAAAAC CATGA
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| Protein sequence | MIMQNIWHKN AIIYSLDVET FMDSNGDGVG DFQGLIERLD YLSGLGINCL WLLPFYPSPN
RDNGYDVMDY YNVDPRLGTL GDFVEFMDRA REQGIHVLID LVVNHTSIEH PWFQAARTDK
NSKYRHYYVW SENPPQDDVE EIVFPHAEDS IWEYDQQAEA YYLHHFYKEQ PDLNIANSEV
REEIRKIINF WLQLGVSGFR VDAVPYLIKE IGVQAERHEL ESFLSEMREF LSLRRADAVL
LAEANVSPDL TCVYFGQGDR MNMLFNFYLN QQMFLALARQ EANPIIDALK SLPKIPKQAQ
WLNFVRHHDE LNLNQLENTQ REEIFQVFAP EEAMQIYKGR GIRRRLPPMF GGDRRRIELT
YSLLFSLPGI PLLRYGDEIG MGDDLSLSDR DSVRTPMQWS SGQNGGFSTS DPEKLTQPMI
SQGEYSYKSV NVAASQRDPN SLLNWMDRLI RIRKQCSELG WGNWQILDTG EPCVFAHSCE
WNNKTVIAVH NLADKSCSIA LKLDGSYYLD DLFGDHQYEV PGESHTISLE AYGYRWFRLN
PIKP
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