| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3912 |
|---|
| Symbol | |
|---|
| ID | 7107317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 4343888 |
|---|
| End bp | 4345450 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643482139 |
|---|
| Product | DEAD-like helicase |
|---|
| Protein accession | YP_002379158 |
|---|
| Protein GI | 218440829 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTCG ACTTTAACAA GTTTTTAACT TCTACCTCCG CTAAACGTCA CGTTGATCCT
GTCGATCTTT TCCAAAGTCT AAAGGTGATC GACCCCGATG TGAAGGATCT TTGGCTGGCT
CAGGGGGATG CCTTACGGGT CTGGCACGCT ATACGAGATC ATAAAGATGT GGCGATCGTT
CTCAATACGG GAGCGGGAAA AACAATGATA GGAGTTATCG CTGCACAATC TCTCGTCAAC
GAAATCAATG ACCACGTTCT CTACGTATGC AGTTCGATCC AACTGGTGGA ACAAACCGCC
AAAAAAGCCG AGGGTTACGG ACTCAAAGTT ACGACTTATT ACCGGAGTGA TTTTAGCAAT
ACACTCTACC AACGAGGGCA AGCTCCCTGT GTGACCACCT ATCATGCCCT TTTAAATGGG
AAATCTCGCT TTTTACAAGA TCTCCCATCT GCGATCATCT TTGATGATGC TCATACCGTC
GAACATCTCC TGCGAGATGC CTTCAGCATC AAGATTAGAC GAGAAACATT TCCCAAAGCC
TTTTCACAGA TAGTAGAACT TTTTCGCCGC TATTACAGGC TGATTCGCTC AGGGGTGGGT
TATGAAGAAA CTAAAAAACA AAGAAACGGC AATAACTATT GGTTTGTACC CCCTTTTGCC
CTCTACGAAC AATATCATGA ATTAGAAAGG ATTTTACTCG ATGCCGATCT CGATGAGGAA
CTCGAAACCC TGTTTTCTTG GGAGCATCTG AAGAATTATC TCGATATCTG CGCCCTGTTC
ATTTCAGGTC AGGAAATTGT CCTAACGCCC CCCGTCATTC CGGTTAGTAC CATTCCTTAC
TTTCAAAAAG GTATCCGTCG GCTTTATCTC TCAGCCACTC TCACGGCAGG GGATAAATTT
ATGAGAACTT TTGGCCGAGT GCCGGAGATA GTTACTCCGA AAACCACCGC CGGGGAGTGT
GAGAGATTGA TCCTCATCCC CTCGATGCAC TCAGATTGTC TCGATGATGT CGCCATCGCT
AAAAGTATTA TTCGAGAGCA AAAAGCTTTA ATTTTAGTGC CTTCTTATCG TCGAGAAGCA
ATTTGGTCTG ATGTGCTGAC CATGCGAGAA AAAGATAATA TTACCGAGAA AATTGAAACG
TTTAAAACAG CCGAAACTCC CGAAAAAATG TCATTAGTCA GTCGCTATGA TGGGATCGAT
TTTCCTGATA AGGATTGTCG CGTCATGGTC ATCGACGATC TTCCCTCCAG TCTCAATCCT
TTAGAAAAAT TCTTTTGGGA AAAACTCGGT TTAGCTAAGT ATTTACGCTC GGCGATTTCC
TCTCGAATCA TTCAGGCATT TGGTCGAATT TCTAGAGGAA TGAGCGACTA TGGGGTGGTG
ATTATTACTA GCCAAAAACT GCGAGATTGG CTACTTGAGC CGAAAAATCG GGCGACTTTA
CCTTTATTTT TGGTTCAACA ACTAGAATTA GGGATGAATA TTTCCGAAGA TACCCCAGGG
CAATCGCATT TAATTTCCCG AACGACGGCT GCGCCTTGGT ATAGGCTGCT TGAATTTGTT
TAG
|
|---|
| Protein sequence | MSFDFNKFLT STSAKRHVDP VDLFQSLKVI DPDVKDLWLA QGDALRVWHA IRDHKDVAIV
LNTGAGKTMI GVIAAQSLVN EINDHVLYVC SSIQLVEQTA KKAEGYGLKV TTYYRSDFSN
TLYQRGQAPC VTTYHALLNG KSRFLQDLPS AIIFDDAHTV EHLLRDAFSI KIRRETFPKA
FSQIVELFRR YYRLIRSGVG YEETKKQRNG NNYWFVPPFA LYEQYHELER ILLDADLDEE
LETLFSWEHL KNYLDICALF ISGQEIVLTP PVIPVSTIPY FQKGIRRLYL SATLTAGDKF
MRTFGRVPEI VTPKTTAGEC ERLILIPSMH SDCLDDVAIA KSIIREQKAL ILVPSYRREA
IWSDVLTMRE KDNITEKIET FKTAETPEKM SLVSRYDGID FPDKDCRVMV IDDLPSSLNP
LEKFFWEKLG LAKYLRSAIS SRIIQAFGRI SRGMSDYGVV IITSQKLRDW LLEPKNRATL
PLFLVQQLEL GMNISEDTPG QSHLISRTTA APWYRLLEFV
|
|---|
| |