Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3866 |
Symbol | |
ID | 7110070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 4301850 |
End bp | 4303892 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643482094 |
Product | NB-ARC domain protein |
Protein accession | YP_002379113 |
Protein GI | 218440784 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.641069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCGAG ATTTACCACA GTTACACCAG CAGTTACAAA CCAAGAACCA AGTAAGTATT TTTGCACTTT TGGGTATTGG CGGCATCGGG AAGACGGAAT TAGCGCTGCA ATATGCTATA AACTATCAAA ATGAGTATCC TGGCGGCTTG TGTTGGCTGG AGGCAAGAGC AGGGGATGTG GGGTCACGGT TATTGAGTTT TGCGCGAATT CATCTCAATC TCTTGATTCC TGAAGGCTTA ACTTTTGAAC AACAAGTAGG TTACTGTTGG CGCAACTGGG TAGAGGGGAA GGCTTTAATT ATTTTCGATG ATGTGCAGGA ATACGGCGCT ATTAAGCCTT ATTTACCTCC ATCAACCCCA AAGTTTAAAG TTTTACTCAC CAGTCGCAAG CGCTTAGGAA ATAATGTTTA TTCTCTCCCG TTAGCGGTTC TTACTCCAGA GGCGGCATTA GAGTTATTAC AGTCCCTTGT TAGTGATGGA CGCATTAGCG CAGAATTAGA ACAGGCACAA AGTTTATGTC AGCAGTTGGG ATATTTACCT TTAGCGATAG AATTAGTCGG GCGCTATCTC TATAAGTCTC CGACAAGAAC TATTTCCCAA GTGCGGCAGC AGTTAGACAG CTTACGGTTA GCGGCAGAAG CACTCTGCAA GCATCCCCAA GATGACGAGG ATATGAACGC TAAGTTAGGG GTAGCGGCGG CTTTTGAGTT AAGTTGGACT ATTTTATCTC CCGAAGCACA AAGATTAGGG TGTCGTTTGA GTTTGTTCGC TGCGACTCCG TTTAAGTGGG AGTGGGTAGA GACTGCTTTT GGTGAAAATG ATGCGGCTGA ATTATACGGG TTACATCTGC TGTCAGGGGG AGAAAATCGT CTGTTTTCGT TACATCCCCT GATTCGGGAA TTTTTCGCTA TGAAGTTGTC GGAGTTGCCA GAAAGGGAAA TAGAGGAGGA TAAGTGCCCT TTTTGTGGGG TAATGGTAGC ACAAGCAAAG GAAATACCTC AAACGCTGAC AGTAGATGAG GTTGCTAGGG TTGGTGTTGT GATTCCTCAT CTAGAAGTAG CCGCAAATAA CCTAATGGAT GTGGTTGAGG ATGAAGATAC AGGTTGGATT TTTTGGGGAC TGGGAAATTA TTATAAGGAA CAAGGACTCT ATCAAGCGGC TGAACCTTGG TATGAAAATT GTTTGAAGGT AGTGAAAACC CGTTTAGGAG ATAACCATCC CGATGTCGTC ACTTCCCTCA ACAATTTAGC AGTATTGTAC GATTCTCAAG GCAGGTACAC AGAAGCCGAA CCTCTCTTAC AAAAAGCCTT AAAGCTAATG CAACAACTTG ACGGAGAAAA CCATCCCCAT GTCGCCACTG CCCTCAACAA TTTAGCATTA TTGTACAAAT CTCAAGGCAG GTACACAGAA GCCGAACCCC TCTATTTACA AGCTTTAAAA CTGAGGCAAC AACTTTTAGG AGACAACCAT CTCAATGTCG CCATTACCCT CAACAATTTA GCAGGATTGT ATGATTCTCA AGGCAGGTAC ACAGAAGCCG AACCCCTCTT ACAACAAGCC TTAGCACTTT TGCAACAACT TGACGGAAAC AACCATCCCC ACGTCGCCAC TTCCCTCAAC AATTTAGCAG GATTGTACCG TTCTCAAGGT AGGTACACAG AAGCCGAACT CCTCTATCAA CAAGCTTTAA AAATAATGCA ACAACTGTAC GGAGACAACC ATCCCGATGT CGCCCAATCC CTCAATAATT TAGCATTACT CTACAACGCA CAAGGTAATT ATACAGAAGC AGAAGCATTG TCTCAACAAG CATTAACCAT TTTTCAGCAA ACATTAGGCA ATCAACACCC TCACACTCAA GACGCTTTGC TGGCAGTAAA AATATCACGA ATGCAAATCC TTCTGCATTG CGATAGACAA ACATTGGTTA GCCATCTACA AGCACTGGCA CAAAGAGCAG AAATTCCCGA ATTTAATCCA GAAGTAGCAC TGGCTATGCT AGAGGCATTA GAGAACAATC CTGATTTATT GTCTGAACTG TGA
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Protein sequence | MGRDLPQLHQ QLQTKNQVSI FALLGIGGIG KTELALQYAI NYQNEYPGGL CWLEARAGDV GSRLLSFARI HLNLLIPEGL TFEQQVGYCW RNWVEGKALI IFDDVQEYGA IKPYLPPSTP KFKVLLTSRK RLGNNVYSLP LAVLTPEAAL ELLQSLVSDG RISAELEQAQ SLCQQLGYLP LAIELVGRYL YKSPTRTISQ VRQQLDSLRL AAEALCKHPQ DDEDMNAKLG VAAAFELSWT ILSPEAQRLG CRLSLFAATP FKWEWVETAF GENDAAELYG LHLLSGGENR LFSLHPLIRE FFAMKLSELP EREIEEDKCP FCGVMVAQAK EIPQTLTVDE VARVGVVIPH LEVAANNLMD VVEDEDTGWI FWGLGNYYKE QGLYQAAEPW YENCLKVVKT RLGDNHPDVV TSLNNLAVLY DSQGRYTEAE PLLQKALKLM QQLDGENHPH VATALNNLAL LYKSQGRYTE AEPLYLQALK LRQQLLGDNH LNVAITLNNL AGLYDSQGRY TEAEPLLQQA LALLQQLDGN NHPHVATSLN NLAGLYRSQG RYTEAELLYQ QALKIMQQLY GDNHPDVAQS LNNLALLYNA QGNYTEAEAL SQQALTIFQQ TLGNQHPHTQ DALLAVKISR MQILLHCDRQ TLVSHLQALA QRAEIPEFNP EVALAMLEAL ENNPDLLSEL
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