Gene PCC7424_3827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3827 
Symbol 
ID7110031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp4258011 
End bp4259270 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content35% 
IMG OID643482057 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002379076 
Protein GI218440747 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATGT TCCCTCGAAA AACTTTAATT ATACTGTTAA TATTTTTGCT GACAGCTTGT 
AGTCTAGATT CCTTGAATCA AATCTTAAAT CAACAAGGAG AACTGTTAAT TTGGTATTCT
TTTCAAGGTA AGATTGCTGA GATTATCAAA GATTCTTTTG GAGAATTTCA ACAATTAAAT
CCAGAAATTC AAATTCTTAG CGAGTATTTA CCTCAAAATC AACTTAAGTC GCAGTTTATT
AAACAAGCAA AAGACGGTTT AGGGGCTACT ATTATCATTG ATTTTTCTCA ACAGATGCTA
GACCTAGTTA AAGCAGATGT TATTCTACCC CTTGATGAAA AAAGTATTGA TTTATCTGGT
TATCTAGACC AAACTTTAAC ACAAATTCGC TATCAGAATA AAATTTATGG TTTACCTTTG
GGTTCTCAGA CGCAAGTGCT TTGCTATAAC CAAGCTATTA TTAAACAATC AAAACAGACT
GATGATACAA GTTTAATTCA ACCTCCCACT CGTTTAGAAG AACTGATAGA ACAAGCGAAA
AAAGGCTATT CAGTAGGCAT GGTTTCGACC TTTGAAGATA CCTTTTGGGG AATGGGAATT
TTTGACGCTC AATGGTTTGA TGATAGAGGG TTGATTCAAC CTCTCAAACT CAAAAACTGG
GCTAAATGGT TAGAGTGGCT TAAAAAAGCG CAAAACATCC CTAATTTTAC CTTAGTGCAG
CAGCGAGAGC TTCTTCATTC TGCTTTTGCT CAAGGGAAAT TAACCTATTA TATCTGTGAT
TCTACTGAGA TTGGGGATTT AAAAAATCAA TTAAAGGATA ATTTACTGAT TGCGCCTCTA
CCATCCCAAG GGGATAGTCC GGCTACACCT CTACTTTATA CCAGAATTAT CATGTTTAAT
CACAGTTGCA ATCAGGATGA AATAGGTCTA GGTCTACAAT TGGCAGAATT TATGACTAAC
CCTGAACAGC AAATTAAAGG GATTGTTCAA TCCCAAGCTT TTATTCCTAT TACTCGAACT
GTTGAAATAG ATGCCCAAAT ATTACCCATA GAAACCATTT TACTGCAACA ATCAAAAACC
GCCATTGCTA TTCCTATAAA CTCTCTTGAA CAAATTAGGT CTATTTTTGA GGAAGGGGAT
ATTTTGTATC AAAAAGCACT TTTAGGCAAT ATAACTTCTA AGCAAGCAGC TTTAAGACTA
ACAGAATTTG CTCAAGGACA AATGCAATCG TTATGGGGAG ACTTGAAAAA TGCTAATTGA
 
Protein sequence
MTMFPRKTLI ILLIFLLTAC SLDSLNQILN QQGELLIWYS FQGKIAEIIK DSFGEFQQLN 
PEIQILSEYL PQNQLKSQFI KQAKDGLGAT IIIDFSQQML DLVKADVILP LDEKSIDLSG
YLDQTLTQIR YQNKIYGLPL GSQTQVLCYN QAIIKQSKQT DDTSLIQPPT RLEELIEQAK
KGYSVGMVST FEDTFWGMGI FDAQWFDDRG LIQPLKLKNW AKWLEWLKKA QNIPNFTLVQ
QRELLHSAFA QGKLTYYICD STEIGDLKNQ LKDNLLIAPL PSQGDSPATP LLYTRIIMFN
HSCNQDEIGL GLQLAEFMTN PEQQIKGIVQ SQAFIPITRT VEIDAQILPI ETILLQQSKT
AIAIPINSLE QIRSIFEEGD ILYQKALLGN ITSKQAALRL TEFAQGQMQS LWGDLKNAN