| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3826 |
|---|
| Symbol | |
|---|
| ID | 7110030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 4256687 |
|---|
| End bp | 4258021 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643482056 |
|---|
| Product | MscS Mechanosensitive ion channel |
|---|
| Protein accession | YP_002379075 |
|---|
| Protein GI | 218440746 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATTG AAAATAGTTT ACCTACCTTA TCTGACGTTA TTACTAAGCA AATTCTCTTT
TTAAACCGTT CTGATGTTCA ACGGCAATTA CTGGCTATTA CCTTTTCTTT AGTCATCAGT
TGGTTTTTAT CCAAATGGTT TTGGCGTTGG TTACAAATCA CCTTTCCTAA AGCAACTGCT
TTTAGTTGGG GTGATGCTAG ATTACCACCT CGCCAATATT TAGCTATGCT CATACAAAAA
CTTGATTTTC CTCTTATTAG TCTGATCATA CTTAATTTAA GCCAAATTGT TTTTATCGCT
CTAGATTATA CGAAGGGACT GCTGATTACC GCGATTAAAT TAATCTGGTT TTATTTATTT
TATCGTTTTT TTCTGGCTTC TTTATATGGG ACTTTTCCTA TTGCGATCGT CCGAGACTAT
CATTATCGTC TCTTAGCACC TTTAGGATTT CTCTTCATTA TAGGAACGAT TATCAACCTG
TACAATAATT TAGAACAATT ATCCCAAATT TCACCCTTTA AACTGTTTAA TACTCCAGTC
ACTTTAGGAA ATATTTTTTT CCTCATCGCT GGATTATATT TTTGGATTGT AGTAGTCATT
CTTCTAGAAA AGTTAATTCT TAATGTTCTT AGACCTCGAA ATCAAATAGA TTTAGGATCA
CTGGAAGCAA GTTTACTGCT CATTCGCTAT TTTTTAATTG CCTTGGGAAT TGTGGTCATT
TTAGGCTATA TTGGAGTGGA TGGAACAGCT TTAGCCGCTA TTACAGGCGG ACTCTCTGTT
GGCATTGGCT TTGGATTGCA ACAGGTCGTC AATAATTTTC TTAGTGGATT TATATTACTT
TTTGAAAGAC TCTTAAAACC GGGTGATATT ATTAGTATAG AAAATCAAGT CTGTGAGGTG
AAAAAATTAG GAATTAGAGC GACTACCGTA AAAATGGCAA CTGACAACTC AGAAAAAATT
ATTCCCAATC AGAAATTTAT TATCTCTGAT TTAACCACTT ATACAGGCAG CGATCGCTTA
GTGAGTTGTT CTATCGTCAT TGGAGTAGGC TATAATTCAA AACCTAAGCA AGTTATGGAG
CTTTTGCTGC AAGTTGCTGA TGCTCATCCT CAAGTTCTCA AAAATCCTGC TCCTCTCGTT
TTTTTTCTTA ACTTCGGCGA TTCAAGTTTA AATTTTGAAT TAAAATTTTG GATGAATTGG
TTAAATGATA TTAATAGGAG AAAACAAATT ATTAGTGATT TAAGCTGTTT AATTTTAGAA
ACTTTTTCTA AACACAAAAT AGAAATCCCT TTTCCTCAAA TTGATATTCA TATCGATCAA
ATTCGTAGCC AATAG
|
|---|
| Protein sequence | MLIENSLPTL SDVITKQILF LNRSDVQRQL LAITFSLVIS WFLSKWFWRW LQITFPKATA
FSWGDARLPP RQYLAMLIQK LDFPLISLII LNLSQIVFIA LDYTKGLLIT AIKLIWFYLF
YRFFLASLYG TFPIAIVRDY HYRLLAPLGF LFIIGTIINL YNNLEQLSQI SPFKLFNTPV
TLGNIFFLIA GLYFWIVVVI LLEKLILNVL RPRNQIDLGS LEASLLLIRY FLIALGIVVI
LGYIGVDGTA LAAITGGLSV GIGFGLQQVV NNFLSGFILL FERLLKPGDI ISIENQVCEV
KKLGIRATTV KMATDNSEKI IPNQKFIISD LTTYTGSDRL VSCSIVIGVG YNSKPKQVME
LLLQVADAHP QVLKNPAPLV FFLNFGDSSL NFELKFWMNW LNDINRRKQI ISDLSCLILE
TFSKHKIEIP FPQIDIHIDQ IRSQ
|
|---|
| |