Gene PCC7424_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3799 
Symbol 
ID7110003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp4226342 
End bp4226971 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content37% 
IMG OID643482029 
Product3'-5' exonuclease 
Protein accessionYP_002379048 
Protein GI218440719 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.954695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTAG ATAATTTTAA AGTTTTGCAA GAGGACTTAT CAGATGAGAT CCTCTCTCGA 
TATTTAAAAG CAGACGCGAT CGCAGTAGAT ACAGAAACAA TGGGGTTAAA TCCTCATCGA
GATCGTCTCT GTTTGATTCA ATTATGCGAT CCGGAGGGTT ATGTTACCGC TATTCGGGTT
ACGAAAGGAC AACAAGAAGC CCCTAAATTA AAACAGTTAA TGGAAGCGTC TAATATTACG
AAAGTTTTTC ATTTTGCCCG TTTTGATGTG GCTCAATTGC GCCATCATTT TGGCATTGAA
ACTACACCGA TTTTTTGTAC AAAAATAGCC AGTAAACTCG CCCGTACCTA TACCTCAAGT
CATGGATTAA AAAGTTTAGT TTTAGAGTTA GAAGGGGTGG AATTAGATAA AACTGCCCAA
AGTTCAGATT GGGGAAATGC GGACAAGTTA TCCGAGGAAC AATTAAGTTA TGCCGCTAAT
GATGTTCGGT ATTTACTGGG AGTTAAAGAA AAATTGATTT CGATGTTAAA CCGAGAAAAT
CGGATGGAAT TAGCCCGAAA TTGTTTTAAT TGCCTTCCCG TTCTTGTTTC TCTTGATCTC
CAGTTTTATC AAAATATTTT TGAACACTAA
 
Protein sequence
MGLDNFKVLQ EDLSDEILSR YLKADAIAVD TETMGLNPHR DRLCLIQLCD PEGYVTAIRV 
TKGQQEAPKL KQLMEASNIT KVFHFARFDV AQLRHHFGIE TTPIFCTKIA SKLARTYTSS
HGLKSLVLEL EGVELDKTAQ SSDWGNADKL SEEQLSYAAN DVRYLLGVKE KLISMLNREN
RMELARNCFN CLPVLVSLDL QFYQNIFEH