| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3798 |
|---|
| Symbol | |
|---|
| ID | 7110002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 4225359 |
|---|
| End bp | 4226324 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643482028 |
|---|
| Product | SCP-like extracellular |
|---|
| Protein accession | YP_002379047 |
|---|
| Protein GI | 218440718 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 0.891607 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTA AACTGATTTA TGGTTCATTG TTGATTGTTT CTTGTTCAAT CTTAGTGGGA
GGTTGCCAGT CCTTAAAAGA CAACCTTCCT TTTACTTCTG TGCCTCAAAC AACTCCCGTT
GTTCTTGCGG ATTCTAATAC TTTAACCTCT CTTGAGGCAA AAATTTATGA CCAAATTAAT
CAATACCGCC GGTCTAAAAA TTTAAGTCCT TTAGAGGTTA ATAATACTAT TGCCCAACAA
GCCAAAATTC ACAGTGAAAG AATGGCCGCT AAAACAGTTC CTTTTTCTCA TCAAGGATTT
GAGGAACGGA TACAAAAAAT TGCTAACACA ATTCCCTATC AAGGGGCGGC TGAAAATATC
GCCTCTAATC AAGGGAAATC CGATCCTGCT ATAACTGCCG TTCAAGGATG GCTTAAAAGT
CCCGGACACC TCAAAAATAT TGAAGGAAAT TTTAATTTAA CTGGGGTAGG AGTCGCCCAA
AATTCTCAGG GGGAATATTA CTTTACGCAA ATTTTTATTA ACTCTGCTGC TGCGGTTAAT
AATACTACTC CTTCTCCAAC TCAAGTTAAT TCTTCTTTCC TAGGTTTAGA AGAGGCAACC
CATCAACAAG TTAATCAATA TCGCCTTTCT AAAAATTTAC CCCCTTTATT GTTAGATGCC
TCTATTAGCG AAGAAGCAAG ACTCTTTAGT GAAAAAATGG CCAACGGAGA AGTGCCTTTT
AGTCATACTG GATTTGATGA ACGGGTAAAA GCCATTGGAA AATCAGTAAA ATTTCAATCG
GTCGCGGAAA ATTTAGCGTT TAATATGGGG TTTGACGATC CGGTTAAAGT CGCTGTCGGA
GGATGGATTA AAAGTCCAGG ACATGAAAAA AATATGAGGG GAGATTTTGA TTTAACTGGC
ATTGGGATTG CTAAAAATAA TGGAGGAGAG TATTATTTTA CTCAACTTTT TGTTAAAAAA
CGCTGA
|
|---|
| Protein sequence | MKTKLIYGSL LIVSCSILVG GCQSLKDNLP FTSVPQTTPV VLADSNTLTS LEAKIYDQIN
QYRRSKNLSP LEVNNTIAQQ AKIHSERMAA KTVPFSHQGF EERIQKIANT IPYQGAAENI
ASNQGKSDPA ITAVQGWLKS PGHLKNIEGN FNLTGVGVAQ NSQGEYYFTQ IFINSAAAVN
NTTPSPTQVN SSFLGLEEAT HQQVNQYRLS KNLPPLLLDA SISEEARLFS EKMANGEVPF
SHTGFDERVK AIGKSVKFQS VAENLAFNMG FDDPVKVAVG GWIKSPGHEK NMRGDFDLTG
IGIAKNNGGE YYFTQLFVKK R
|
|---|
| |