Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3770 |
Symbol | |
ID | 7109974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 4193053 |
End bp | 4194840 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643482000 |
Product | Integrin alpha beta-propellor repeat protein |
Protein accession | YP_002379019 |
Protein GI | 218440690 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.707249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAATTC TTCATGACCC AAATAATGCC ACTCTCGATT ACAACGGAGC TAATCAATTA GCTTTTATGC CGGCGCAGTT AACAACACAA AATAGTCAAG CTTGGCAACT GACTCAAACC TTCGTCAATC CTACTCCAGC AACGGGCGAC CAATTCGGCT TTTCAGTGTC TATCAGTGAT AACAATGTCC TAATCGGAGC TTTTGGTGAC GGAGGGCAGA CAGGGGCAGC TTATTTATAT GATGGGGAAA CCGGACAACT TCGACAGACT TTTACCCCTC AAGGAGATGA TATTTTCCGC TTCGGCTATT CAGTAGCCGT TGGTGGAAAC AATGTAGTTA TCGGCGCTCC TGGGGATCTT GGCACTAGAC TTACAGAGTA TGTTTATCTG TACGATGGAG TAACCGGTCA ACTACTAGAG AACTTTTCTT ATAGCACTTC AAATAGTTTC ATAAACACTG CCGAATTTGG TGAAGCAGTA GACATCAGTG ATAACCAGAT TGTTGCCGGC GCTCCGTTAG ACCGTTCGGA AGGAGCGGCT TATCTGTTGG ATGTTGATGG GACAGTTATA CGGGACTTAT TTGAGCCTCC TGGAAACCCA CCTTTTGACT CCTTTCCCTA TTTCGGTGAG TCAGTAGCCA TCAGTGGCAA CAATGTTATT GTCGGAGCGC CTAATACAGG AACAATTGAA GGGGAGGCTT ATCTGTTCAA TGCGGCAACC GGCCAAGTTT TACAAAATTT TGTCAATCCC TATCCCCAAA ATTTTGCCCG TTTTGGTGAC TCAGTGGCGA TTAGTGGCAA TAATGTTCTT ATCGGCGCTC CTGAACAATC TTCCGGTGAA ATTATTAATT TTGCTGGGAT GGCTCTAGAG ATTAGTGGTG GGGCGGCTTA TTTATTTAAT GGGCAAACTG GCCAACTCAT ACAAGGTTTT GCCAACCCTA ATACAAACCG AGGTAATGAT TTCGGCTTTT CAGTGGCTAT TGATGGCAAC AATGTCCTTA TCGGGGCAGT TAATGGGGCT TATCTGTACG ATGGGCCAAC AGGCCAGCTT TTACAAACTT TTACCCCCAG TTCAACAGGG GCTTCCCATT CAGTAGCCAT CAGTGGTAAT AATATCCTCA TCGGTGTAGC GGGTGACGAC GCAGGAGCAA CTGACAGTGG GGCGGTTTAT TTATATGAGC TTGTTACTGG TCAAAATCCC CCTAATCCGG AGGTAAATCC CCCTAATCCG GAGGTAAATC CCCCTAATCC GGAGGTAAAT CCCCCTAATC TGGAGGTAAA TCCCCCTAAT CCGGAGGTAA ATCCCCCTAA TCCGGAGGTA AATTCCCCTA ATCCTGACTT TTTATCCGCT TTAGAAGCTC CAGTTTACCG CTTTTTCAAT ACCATAGCCG GCGGCCATTT TTTCACCACT TCCCCGACAG AACGCGATAC TGTTCTTAAC ACTCTGCCTC AGTATGTTTA TGAGGGGGTT GGTTTTAGAG CTTCTCAGGT AGGGGGTGAC AATTTGTTCC CTGTTTATCG TTTTTATAAT ACGGTGGCAG GGGGTCACTT TTTTACCCTC AATGAACAAG AACGAGACAC CGTTATTAAT ACCTTTCCTC AGTATGTTTA TGAAGGGATA GGATTTTATG CTTATGGGGC TGATAGCAAT TTAGGACAAG ATAGTTACCG TTTTTATAAT ACGGTGGCAG GGGGTCACTT TTTTACCCTC AATGAACAAG AACGAAACAC CGTGATTAAT TTGCCTCAGT ATGTTTATGA ACAGGTAGGT TTTGAAGCCG CACCATAG
|
Protein sequence | MTILHDPNNA TLDYNGANQL AFMPAQLTTQ NSQAWQLTQT FVNPTPATGD QFGFSVSISD NNVLIGAFGD GGQTGAAYLY DGETGQLRQT FTPQGDDIFR FGYSVAVGGN NVVIGAPGDL GTRLTEYVYL YDGVTGQLLE NFSYSTSNSF INTAEFGEAV DISDNQIVAG APLDRSEGAA YLLDVDGTVI RDLFEPPGNP PFDSFPYFGE SVAISGNNVI VGAPNTGTIE GEAYLFNAAT GQVLQNFVNP YPQNFARFGD SVAISGNNVL IGAPEQSSGE IINFAGMALE ISGGAAYLFN GQTGQLIQGF ANPNTNRGND FGFSVAIDGN NVLIGAVNGA YLYDGPTGQL LQTFTPSSTG ASHSVAISGN NILIGVAGDD AGATDSGAVY LYELVTGQNP PNPEVNPPNP EVNPPNPEVN PPNLEVNPPN PEVNPPNPEV NSPNPDFLSA LEAPVYRFFN TIAGGHFFTT SPTERDTVLN TLPQYVYEGV GFRASQVGGD NLFPVYRFYN TVAGGHFFTL NEQERDTVIN TFPQYVYEGI GFYAYGADSN LGQDSYRFYN TVAGGHFFTL NEQERNTVIN LPQYVYEQVG FEAAP
|
| |