| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3768 |
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| Symbol | |
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| ID | 7109972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 4185591 |
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| End bp | 4191485 |
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| Gene Length | 5895 bp |
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| Protein Length | 1964 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643481998 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_002379017 |
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| Protein GI | 218440688 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.370442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACC CACAACAGCC CCAAAACAAC GATACTTTAG ACCTTCAAGA ATTATTAAAA
ACTTTAATCG CCATTAAAAA AGGAGATTTT TCGGTTCGTC TTCCTCTCGA TCATACCGGC
ATGGCCGGAA AAATCGCTGA TACTCTCAAC GAAATCATCG AATTAAATCA AAAAATGGCG
GCAGAATTAG AGAGGATCTC GTCTGTTGTG GGCAAAGATG GACAATTGCA AATGCGGGCA
AATTTACCCA ATGCAGAGGG ATGTTGGGCA GAATGTATCA ATTCTGTTAA TCATCTCATT
ACCGATCTTG TGCAACCTAC CGCAGAAACC GCTAAAGTGA TCCGGGCAGT CGCTAATGGG
GATCTCTCTC AAACCATCGC TACAGAAATT GAAGGACGAC CCCTAAAAGG CGAATTTCTC
TCGACGGCTA CGGTCGTTAA TACAATGGTA GCTCAATTGA GTTCTTTTGC GTCTGAAGTG
ACTAGAGTGG CGCGAGAAGT GGGAACTGAG GGAATGTTAG GAGTACAGGC AGAAGTCGGC
GGCGTGGCCG GAACCTGGAA AGATTTAACC GACTCCGTTA ATCAAATGGC CGGCAATTTA
ACCGCCCAAG TCCGTAATAT TGCTGAGGTA GCAACGGCGA TCGCATCAGG GGATTTATCG
AAAAAAATTA CCGTCAATGT CAGAGGAGAA ATTTTAGAAC TCAAAAACAC CGTTAATACA
ATGGTGGATC AACTGAACTC TTTTGCCAGG GAAGTCACCA GAGTTGCCAG GGAAGTGGGA
ACAGAAGGGA AATTAGGAGT ACAGGCAGAA GTTCCGGGAG TGGCGGGAAC TTGGAAAGAT
TTAACCGACT CGGTTAACCT GATGGCCGGC AATTTAACGG CGCAAGTCAG GGATATTGCG
GAAGTGACCA CCGCCGTCGC CAATGGGGAC TTATCAAAAA AAGTCACCGC CGATGTCAAA
GGGGAAATTT TAGAACTGAA AAACACCGTC AATACAATGG TGGTTCAATT AAATTCTTTT
GCCTCGGAAG TGACCCGGGT AGCGCGAGAA GTCGGGGCAG AAGGGAAATT AGGCGGACAA
GCAGAAGTAA GAGGCGTGGC CGGAACCTGG AAAGATTTAA CCGATAGTGT GAATTTTATG
GCCGGGTCGT TAACTGCCCA AGTCCGTAAT ATTGCGGAAG TCACCACCGC CGTCGCTAAT
GGGGACTTAT CGAAGAAAAT TACCGTTGAT GTGAAAGGAG AAATATTAGA ACTCAAAAAC
ACGATCAATA CAATGGTCGA TCAACTGAAC TCCTTTGCCT CAGAAGTGAC ACGAGTAGCG
CGAGAAGTGG GAACAGAAGG GAAATTAGGG GTACAGGCAG AAGTCCGAGG CGTGGCCGGA
ACCTGGAAAG ATTTAACCGA TAGTGTGAAT TCCATGGCCG GCAATTTAAC CGCCCAAGTC
CGTAATATTG CGGAAGTAGC AACGGCGATC GCATCAGGAG ATTTATCGAA AAAAATTACC
GTTGATGTCA AAGGGGAAAT CTTTGAATTA AAAAATACGA TTAATATTAT GGTGGATCAG
CTTAACTCCT TTGCCTCAGA AGTGACTAGG GTGGCGCGAG AAGTGGGGGC AGAAGGTAAA
TTAGGCGGAC AAGCAGAAGT AAGAGGGGTG GCCGGAACCT GGAAAGATTT AACCGATAGT
GTTAATTTTA TGGCTGGATC GTTAACCGCC CAAGTCCGTA ATATTGCGGA AGTGACCACC
GCCGTCGCTA ATGGGGACTT ATCGAAGAAA ATTACCGTTG ATGTGAAAGG GGAAATATTA
GAACTCAAAA ACACGATCAA TACAATGGTC GATCAACTGA ACTCCTTTGC CTCGGAAGTG
ACTAGAGTCG CGCGAGAAGT GGGAACAGAA GGGAAATTAG GGGTACAGGC AGAAGTCCGG
GGCGTGGCCG GAACCTGGAA AGATTTAACC GATAGTGTGA ATTCTATGGC CAGTTCCTTA
ACCGCCCAAG TCCGTAATAT TGCGGAAGTG ACCACCGCCG TCGCTAATGG GGACTTATCG
AAAAAAATCA CCGTTGATGT GAAAGGGGAA ATATTAGAAC TCAAAAACAC GATCAATACA
ATGGTCGATC AACTGAACTC CTTTGCCTCG GAAGTGACTA GGGTGGCGCG AGAAGTGGGA
ACAGAAGGGA AATTAGGGGT ACAAGCTTAT GTTAAAGGGG TGGCGGGAAC CTGGAAAGAT
TTAACCGATA ATGTTAATTC TATGGCCAGT AATTTAACCG GCCAAGTCCG TAATATTGCG
GAAGTGACTA AAGCGGTAGC GAGTGGGGAC TTATCGAAAA AAATCACCGT TGATGTGAAA
GGGGAAATAT TAGAACTCAA AAACACGATC AATACAATGG TGGATCAACT GTCCTCCTTT
GCCTCCGAAG TCACCAGGGT AGCGCGGGAA GTGGGAACAG AAGGAAAATT AGGCGGACAG
GCGCAAGTGA CAGGAGTCGC CGGAATTTGG AAAGATTTGA CCGATAATGT TAATTCGATG
GCCGGCAATT TAACTGCCCA AGTCCGAGGT ATCGCTAAAG TGGTGACGGC GGTGGCGAAT
GGAGACTTAA AACGGAAATT AATGTTAGAT GCCCAAGGAG AGATCGAAAC CTTAGCCGAT
ACCATTAATG AAATGATAGA TACCTTGGCG ACGTTTGCCG ATCAGGTGAC GACGGTGGCG
CGAGAGGTAG GAATAGAAGG AAAATTAGGC GGACAAGCTA AAGTTCCGGG GGCTTCTGGG
ACTTGGCGAC ACTTAACCGA CAATGTTAAC GAATTAGCCG CCAATTTAAC CACTCAGGTC
AGAGCGATCG CAGAAGTGGC CATAGCTGTG GCTAAGGGAG ACTTAACCCG GTCGATTTCG
GTACAGGCAG AAGGAGAATT AGCGGTATTA AAAGATAATA TTAACCAAAT GATTGCTAAT
TTACGGGAAA CCACCCAAAA AAATACTGAG CAAGATTGGT TAAAAACGAA TTTAGCGAAA
TTTACCCGAA TGTTGCAAGG TCAACGAGAT TTAGAGGCCG TATCTAAGTT AATTCTCTCA
GAATTGGCAG CCTTAGTGGG GGCACAACAT GGGGTGTTTT ATTTAATGGA TGAAAAAGAA
CAAACCCCCA TTTTAAAACT GCTGTCAAGT TATGCCTATC GAGAACGAAA ACATCTCTCA
AACCGTTTTT ATTTAGGAGA GGGGTTAGTG GGACAATGTG CCCTAGAAAA AGAGAGAATT
TTATTAACTT CCGTTCCCGA TAACTATATC AAAATTAGCT CAGGATTGGG AGAAGCTAGC
CCTCTTAATG TAGTGGTGTT ACCGGTGGTA TTTGAGGGAG CAATTACCGG GGTCATTGAA
TTAGCCTCAT TTCACTATTT TAATGAAATT CATCTCACCT TTTTTGACCA ATTAACCGAA
AGTATCGCCA TTGTTTTAAA TACGATCGCC GCTTCCATGC GGACAGAAGA ACTCCTCAAA
CAATCTCAAT CTTTAGCCCA AGAATTACAA ACCCAACAGG GAGAATTAAG AGAAACTAAT
CAGCGCTTAG AACAACAGGC ACAGTCCCTA AAAGCCTCCG AAGAATTGCT CAAAAAACAA
CAAGAACAAC TGCAACAAAC CAATGAAGCC CTAGAAGAAA AAGCCCGTTT ACTCTCCTTA
CAAAATGAAG AAGTTGAACG CAAAAACGCC GAAATAGAAC AAGCTAGACG ATCCTTAGAA
GAAAAAGCCG AACAACTCGC CTTGACTTCT CGATATAAAT CAGAATTCTT GGCCAATATG
TCCCATGAAT TACGCACTCC CTTAAACAGC TTGTTAATTT TGGCGAAACT TTTAGCCGAT
AACGTAGAAA ATAATCTGAC TCCGAAACAA GTAGAATATG CCGCCACAAT TCACTCATCC
GGCAGTGACC TATTAGGATT AATTAACGAT ATTTTAGACT TAGCTAAAAT TGAGTCTGGA
ACAATGTCCG TTGAAATTGA ACAGATGCAA CTAGCAGAAG TTCGTCATCA ACTCGATCGC
GCTTTCCGAC AAATTGCCCA TGATAAAGGA TTAGACTTTG AGATTAACTT TGATCCCAGA
CTTCCTAAAG CCATTTATAC CGATTCTAAG CGGTTGCAAC AAGTCCTTAA AAATTTACTC
TCCAATGCCT TTAAATTTAC CGCTAAAGGA CAAGTCAGTT TAGAAGTAGA ACCGGCTTAT
CAAGGTTGGA GTCAGGATCA TGAAATTTTA AATCAGGCAG AATTAGTTAT CTCTTTTTCT
GTCAGTGATA CGGGGATAGG TATCGCCCCA GAAAAGCAAA GATTAATTTT TGAAGCCTTT
CAACAAGCCG ATGGCACAAC CAGCCGTCAA TATGGAGGAA CAGGGTTAGG ATTATCCATT
AGCCGAGAAA TTGCCCGATT ATTGGGGGGT GAAATTACCG TCATTAGTCG TTTAGGGCAT
GGTAGCACCT TTACCCTCTA TCTCCCTCAA ACCTATCTCG GCATTTCTGA AACCGTTCCA
ACTCAACATC TCGCCCAAAC CACCAGCATT ATTGCCCAGT CCCCCTACCC CTCGGAAAAT
ACGGGAGTGA CTCAACCCTC CTCTTCCCCA GACGCAAAAG CCCAAAATCA TCATCTTCCC
ACTCTCCAAA CTTCAAGGAA ACCCTTGACA AAAAAAGAAG AGTATGATAG TGAATTTCAT
CCCACAACTT GGGGAGATGA CCGCAGTTCC ATAGAGCCGG GCGATCGGAT TATATTAATT
GTGGATGACG ATCTTAATTT TGCCCGATTA GTCTTAGAAA TTGCCAGAGG ACAAGGATTT
AAAGGCTTAA TTGCCTTGCG AAGTTCTACC GCTTTAGCGA TGTTACAGAA ATATCAACCT
TGCGCCGTCA CGTTAGATAT TTGTTTACCT GGGGATAGTG GGTGGACGAT ACTCGATCGC
ATAAAACACG ATCCCAAAAC CGTACATATT CCGGGCATTA TTATGTCAGT CAATAACGAT
CGGCAACGGG GGCAAAAATT GGGAGCATAC AGTTATTATC AAAAGCCACT CACGAGGGAA
AATTTAGTCA AAATTATGGC AGGACTTAAA CAATTTATTG AACGTCCTGT TAAAAATTTG
CTCTTAGTTA CGGTTGACCA AGAAGCAGCG ATCAACGAAC TTTTAGGCAA TAGTGACATT
CAAATAATCA CCGTTGCTGA AATTCCCCAA ATCAGAGGCT ATCTAGAGAA TAATGAACCG
GTGATAGATT GTCTCATTGT AGATAGTAGC TTACCGGAAA TGACCCATTG GACTTTAATA
GAAACCCTCA AAGAAGACCT AATTAAAAAA CAACTGCCAC TCATTATTTA TGGTCAACCT
AATTTGAGTG AAGCCCAAAA ATTAGACCTT GAGGGGATAA GTCATAGTAT CCCCGTCAAA
ATAGCGGATA ATGAGCTAAA ACTCGTTCAA GAAACCGCCT TATTGTTGCA TCGCAAACAG
TCAGACTTAC CTGAAAAAGG TCAGAATATG CTTAAACAAT TACGCCACAA TTTAGATAAT
ATTCTGGCCA ATAAAAAAGT CTTGATTGTC GATGATGATG TTCGTAATAT ATTCGCCCTC
ACCAGTCTAT TAGAACGATA TCAAATGCAA GTCATCCCCG CAGAAAATGG GGCAGCCGGT
ATCGCTTGTC TTCAAAACAG CACTGATATT GACTTAGTGT TAATGGATGT GATGATGCCT
GGGATGGACG GTTACGAAAC CATGAAAGCG ATCCGAAAAC TGCAACAATT TCAGTCATTG
CCCATTATTG CTCTAACTGC CAAAGCGATG AAAGGCGATC GAGATAAATG TCTGGATGCT
GGAGCTTCAG ATTATATTAC CAAACCCGTT GATACTGAGC AATTACTCTC TATTTTACGA
GTTTGGTTGT CTTAA
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| Protein sequence | MSNPQQPQNN DTLDLQELLK TLIAIKKGDF SVRLPLDHTG MAGKIADTLN EIIELNQKMA
AELERISSVV GKDGQLQMRA NLPNAEGCWA ECINSVNHLI TDLVQPTAET AKVIRAVANG
DLSQTIATEI EGRPLKGEFL STATVVNTMV AQLSSFASEV TRVAREVGTE GMLGVQAEVG
GVAGTWKDLT DSVNQMAGNL TAQVRNIAEV ATAIASGDLS KKITVNVRGE ILELKNTVNT
MVDQLNSFAR EVTRVAREVG TEGKLGVQAE VPGVAGTWKD LTDSVNLMAG NLTAQVRDIA
EVTTAVANGD LSKKVTADVK GEILELKNTV NTMVVQLNSF ASEVTRVARE VGAEGKLGGQ
AEVRGVAGTW KDLTDSVNFM AGSLTAQVRN IAEVTTAVAN GDLSKKITVD VKGEILELKN
TINTMVDQLN SFASEVTRVA REVGTEGKLG VQAEVRGVAG TWKDLTDSVN SMAGNLTAQV
RNIAEVATAI ASGDLSKKIT VDVKGEIFEL KNTINIMVDQ LNSFASEVTR VAREVGAEGK
LGGQAEVRGV AGTWKDLTDS VNFMAGSLTA QVRNIAEVTT AVANGDLSKK ITVDVKGEIL
ELKNTINTMV DQLNSFASEV TRVAREVGTE GKLGVQAEVR GVAGTWKDLT DSVNSMASSL
TAQVRNIAEV TTAVANGDLS KKITVDVKGE ILELKNTINT MVDQLNSFAS EVTRVAREVG
TEGKLGVQAY VKGVAGTWKD LTDNVNSMAS NLTGQVRNIA EVTKAVASGD LSKKITVDVK
GEILELKNTI NTMVDQLSSF ASEVTRVARE VGTEGKLGGQ AQVTGVAGIW KDLTDNVNSM
AGNLTAQVRG IAKVVTAVAN GDLKRKLMLD AQGEIETLAD TINEMIDTLA TFADQVTTVA
REVGIEGKLG GQAKVPGASG TWRHLTDNVN ELAANLTTQV RAIAEVAIAV AKGDLTRSIS
VQAEGELAVL KDNINQMIAN LRETTQKNTE QDWLKTNLAK FTRMLQGQRD LEAVSKLILS
ELAALVGAQH GVFYLMDEKE QTPILKLLSS YAYRERKHLS NRFYLGEGLV GQCALEKERI
LLTSVPDNYI KISSGLGEAS PLNVVVLPVV FEGAITGVIE LASFHYFNEI HLTFFDQLTE
SIAIVLNTIA ASMRTEELLK QSQSLAQELQ TQQGELRETN QRLEQQAQSL KASEELLKKQ
QEQLQQTNEA LEEKARLLSL QNEEVERKNA EIEQARRSLE EKAEQLALTS RYKSEFLANM
SHELRTPLNS LLILAKLLAD NVENNLTPKQ VEYAATIHSS GSDLLGLIND ILDLAKIESG
TMSVEIEQMQ LAEVRHQLDR AFRQIAHDKG LDFEINFDPR LPKAIYTDSK RLQQVLKNLL
SNAFKFTAKG QVSLEVEPAY QGWSQDHEIL NQAELVISFS VSDTGIGIAP EKQRLIFEAF
QQADGTTSRQ YGGTGLGLSI SREIARLLGG EITVISRLGH GSTFTLYLPQ TYLGISETVP
TQHLAQTTSI IAQSPYPSEN TGVTQPSSSP DAKAQNHHLP TLQTSRKPLT KKEEYDSEFH
PTTWGDDRSS IEPGDRIILI VDDDLNFARL VLEIARGQGF KGLIALRSST ALAMLQKYQP
CAVTLDICLP GDSGWTILDR IKHDPKTVHI PGIIMSVNND RQRGQKLGAY SYYQKPLTRE
NLVKIMAGLK QFIERPVKNL LLVTVDQEAA INELLGNSDI QIITVAEIPQ IRGYLENNEP
VIDCLIVDSS LPEMTHWTLI ETLKEDLIKK QLPLIIYGQP NLSEAQKLDL EGISHSIPVK
IADNELKLVQ ETALLLHRKQ SDLPEKGQNM LKQLRHNLDN ILANKKVLIV DDDVRNIFAL
TSLLERYQMQ VIPAENGAAG IACLQNSTDI DLVLMDVMMP GMDGYETMKA IRKLQQFQSL
PIIALTAKAM KGDRDKCLDA GASDYITKPV DTEQLLSILR VWLS
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