| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3729 |
|---|
| Symbol | truA |
|---|
| ID | 7110238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 4150535 |
|---|
| End bp | 4151455 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643481959 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_002378978 |
|---|
| Protein GI | 218440649 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATAATC CTCACCCTAA TGGAGAAAAA CAGCGAGTAG CCCTAGTGAT TCAATATCTG
GGGACGCATT TTCATGGGTG GCAACGTCAA CCTAACCGAC GCACCGTGCA AGAAGAAATC
GAAAGGGCGA TCGCCGTTGT GATCGGACAG CCTGTGACTC TACACGGAGC CGGAAGAACG
GATACAGGGG TTCACGCTGC GGCGCAAGTC GCTCATTTTG ACCAAATTAG TCCTATTCCG
CCTGGCCGTT GGGCTTCGAT TCTCAATTCT CGTTTGCCGG ATGATATCAT TGTCCGAGCC
TCCAATCGAG TCTGTGATCG CTGGCACGCG CGCTTTTCTG CTTGCTGGAG AAGATACCGC
TATACTATAT ACACCGATAA GCAACCCAAC TTATTTATTA AGCCTTTCAG TTGGCACTAT
TATCATCAGC CCCTAGAAGA ATCTCTGATG CAATCTGCCC TCGATCCTTT ATTAGGAAAA
CATCACTTGG CGGCTTTTCA TCGAGCTAAT TCTGCCCGAA CTCACTCATG GGTAGAAATT
CAAGCAGCAC ACTGTTATAG AATCGGGCCG TTTGTTCACA TCGAAATTCA AGCCAATGGA
TTTTTGTATG GAATGGTACG ACTGTTGGTA GGAATGTTAA TAGAAGTTGG GAATAAACAG
CGCTCGATAG AGGACTTTAC CCGGATTTGG CAAAACCAGA GACGGGAAGA AGTTAAATAT
GCTGCTCCAG CTAAGGGGCT ATGTTTATTA AGAGTAGGTT ATCCGGAATT TCCCTTTGCC
CCTAACATTT GGTATGATAC TCAACCTATT TTTATCTTTA ATCAATGGGG GCAAACACAT
TCTCTATCAA GAGACACGAT TGAACACCTT TCTAACCACT GTGTAACTCA AAAGGACAAT
GGAAAAAACA ACCCTGCCTA A
|
|---|
| Protein sequence | MDNPHPNGEK QRVALVIQYL GTHFHGWQRQ PNRRTVQEEI ERAIAVVIGQ PVTLHGAGRT
DTGVHAAAQV AHFDQISPIP PGRWASILNS RLPDDIIVRA SNRVCDRWHA RFSACWRRYR
YTIYTDKQPN LFIKPFSWHY YHQPLEESLM QSALDPLLGK HHLAAFHRAN SARTHSWVEI
QAAHCYRIGP FVHIEIQANG FLYGMVRLLV GMLIEVGNKQ RSIEDFTRIW QNQRREEVKY
AAPAKGLCLL RVGYPEFPFA PNIWYDTQPI FIFNQWGQTH SLSRDTIEHL SNHCVTQKDN
GKNNPA
|
|---|
| |