Gene PCC7424_3719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3719 
SymbolrpsE 
ID7110228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp4144289 
End bp4144810 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content48% 
IMG OID643481949 
Product30S ribosomal protein S5 
Protein accessionYP_002378968 
Protein GI218440639 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC GTCGTAAAAG TAGCCGAACA AAAGAAAAAG AAACCAACTG GCAAGAACGG 
GTGATTCAAA TCCGCCGGGT CAGCAAAGTC GTTAAAGGAG GTAAAAAATT AAGCTTCCGA
GCGATCGTTG TTGTTGGCAA TGAAACCGGT CAAGTCGGTG TAGGAGTCGG TAAAGCCGGC
GATGTTATTG GGGCTGTCCG TAAGGGAGTC GCTGACGGCA AAAAACAACT GATAGAAGTC
CCTTTAACTA AAGCCAGTTC TATTCCCCAT CTCACCAATG GAGCATCTGG CGGAGCATCC
GTAATTATGC GCCCTGCTGC TCCAGGGACT GGGGTAATTG CCGGGGGAGC AGTCCGAACC
GTACTAGAGT TAGCCGGAGT GAAAAATATT CTCGCTAAAC AGCTTGGTTC TGATAACCCC
CTCAATAACG CCAGAGCGGC CATCAATGCC CTAGAAACTC TCAGGACATT TTCAGAAGTG
GCTAAAGAAA GAGACGTTCC TCTAGAACAT ATCTATAGTT AA
 
Protein sequence
MAKRRKSSRT KEKETNWQER VIQIRRVSKV VKGGKKLSFR AIVVVGNETG QVGVGVGKAG 
DVIGAVRKGV ADGKKQLIEV PLTKASSIPH LTNGASGGAS VIMRPAAPGT GVIAGGAVRT
VLELAGVKNI LAKQLGSDNP LNNARAAINA LETLRTFSEV AKERDVPLEH IYS