Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3715 |
Symbol | rplE |
ID | 7110224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 4142283 |
End bp | 4142825 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643481945 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_002378964 |
Protein GI | 218440635 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAC GACTGAAAAC CGTCTATTAC GAAACCATTG TTCCTAAACT CAAAGAACAA TTTAACTACA CCAATATCCA TCAAGTCCCC AAAGTCATTA AAGTGACTGT AAACCGAGGA CTCGGAGATG CTTCGCAAAA CGCTAAAGCC CTAGAATCAT CCATTGCTGA ACTGGCCACC ATCACAGGAC AAAAACCCGT CGTGACTCGC GCCAGAAAAG CGATCGCCGG ATTTAAAATC CGTAAAGGAA TGCCCGTCGG CGTTATGGTG ACTTTACGTT CAGAGCGAAT GTACGCCTTT TTAGACCGGC TCATTAGTTT AGCCCTTCCC CGAATTCGAG ACTTTCGAGG CATTAGCGGC AACAGTTTTG ACGGTCGAGG TAATTATAGT TTGGGCATTA GAGAACAATT AATCTTTCCC GAAATTGACT ACGATAAAAT CGATCAAATT CGAGGCATGG ATATCTCAAT CATCACCACC GCTCAAACCG ACGAAGAAGG CCGAGCTTTA TTAACAGAAA TGGGAATGCC CTTCCGTAAA TAA
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Protein sequence | MTQRLKTVYY ETIVPKLKEQ FNYTNIHQVP KVIKVTVNRG LGDASQNAKA LESSIAELAT ITGQKPVVTR ARKAIAGFKI RKGMPVGVMV TLRSERMYAF LDRLISLALP RIRDFRGISG NSFDGRGNYS LGIREQLIFP EIDYDKIDQI RGMDISIITT AQTDEEGRAL LTEMGMPFRK
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