| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3673 |
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| Symbol | |
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| ID | 7110182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 4101274 |
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| End bp | 4105062 |
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| Gene Length | 3789 bp |
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| Protein Length | 1262 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643481905 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_002378924 |
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| Protein GI | 218440595 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAA CCAACTCCAA CCAAGAACAG TTGCTTTTAA AAATAACAAA TCTTATTCAC
CACAATCTAG ATTTTACGGA TACTATACAA AAAATTACTC AAGCTGCCCA GGACTTTTTA
AAAATAGACC GAGTAACCAT TTATCAATTT GCTCAAGATG GAAGCGGAGA AGTGATCGCA
GAATCAACCA CTCCTACTCG TTTACCCTCA TTATTAGGAT TACATTTTCC CGCCTCAGAT
ATTCCCTCAA AATCCCTAGA ACAATTTGCT AAATTACGCT CAAGCAGTAT TATCGATGTC
AGTGCTAAAC GCAAGACCAT CAATAGTTTC AATGAATACA GCGATGGAAA ATCGAATACT
CTTTATATCC CCACTTACTC TACAGTCGAT CCTTGTCATC TTCAATATCT CTTAGCGATG
GGAGTGCTTT CTTCTCTGTC AATGCCGATC TTTTATTGGG ATCAATTGTG GGGATTACTC
ATCGCTCATC ATAGCGAACC TCGGCGGTTT TCCAGAGAGG AATTATGGAC AATAGAACTC
TGGTGTCGGC AAATTTCTTT AGCTTTAGCT CAAAATACAT TAGTTTCCCA ATTTCAAAAA
CAAAAGCAAC AAGAACACTT TATAGAAACG ATTAATCGTC TGATTGATAA TCAATCTAAT
TTAAGTGAAT GTTGGCAAAA AATTTTATTA GAAACCCTAA AAACTTTACA AGCAGACGGA
GCAAGACTTT ATATTGTCTC AGAATTAACC GGACAAGGGG ATCAACTCTA TACTTACGGA
AGTCAACCCC TCTTTCCCCA ATTAGAAGAA CAACCCCAAT GGCAACAGTT GATGAAGGGC
AAACTCTCTC AACCCGATGA TTCCTCTTAT CCTTCAACTC GTCCCTTTAC CTGTACTCTA
GCTCAACTGT CCGCCGATCC CCAGTATCAT TTACTCAGTA AAGCTTTTGG CAATCAATCG
ATACAGTCTT TTTTATTTAT TCCTTTGCGT TCCCGCAGTC AATGGGTAGG ATGTTTAACT
CTCTTTCGTC AAGAACAGGA ATGGGAAACC CTCTGGGCCG GACAACAAAA ATTAGATCAG
CATAACTCAA CCCCTAGACA ATCTTTTTCT CCTTGGTGTG AAATTCAGCG AGGTGTTCGG
GAGTGGAGTA CGGATGAATT GAAACTTGCC GAAGTGTTAG GTCTTCATCT GTATATGATC
GTGATTCAAC AACGATTAAC CCGTCTCATT CGTCATCAAG CGTCTTATGA TGTGATTACT
CAATTGCCCA ACGGGATCAT CTTTAATCAT CGTTTATCCT TAGCTTTAGT CGATGCCGTT
AATCAAGGGA ATATGTTAGG GGTTGTTATT CTTGACCTCA ATCAGTTTAA ACGGATCAAT
GATTCTTTAG GTCATGGAGT CGGGGATTTT CTCTTAACTA AAGTGCGCGA TCGCCTACAA
AATGCCCTCG ATACTTATTC AATCTTTAAC CCTTTATTGG CGCGTTGGCA TGGAGCGAGA
TTTATTATTT TACTGTCTAA GCTTTCTTAT AGTGACGAAT CGGTGATGGT TTGTCAAAAA
CTTTTAAATG ATTTTCAAGA ACCGTTTTAT GTCCAAAGTC AAGCGATTTA TTTAGGCGCA
AGTCTAGGAA TTGCTTTAGC TCCTTATGAT GGAGATACTG CCGAAATTCT GCTCAAAAAT
GCCGAATCGG CCATGTATGA AGCTAAAAAA CAAGGGAAAA ATACTTATCA AATTTATCGT
CCTGGCTCAG ATCACGATAA GAATAAACTC ATTTTAGAAG CCGATTTACG CAAAGCGATC
GAGCGCAACG AATTTGTTTT ACATTATCAA CCCCAAATCG ATTTAAACAC CCGTAAACTG
ATCGGAGTAG AAGCCTTAAT CCGTTGGCAA CATCCCAGTT TAGGCATGGT TTCACCGGCG
TTATTTATTC CGTTAGCCGA AGAAACCGGC TTAATTTGTC CCTTGGGAGA ATGGGTATTA
AGAACAGCTT GTCATCAATA TCGAATTTGG CAAAAGGCAG GGTTTCCTAA AATTCAAATG
GCGGTCAATC TTTCGGCTTT TCAACTGCAA CAAGACGACA TCGTTGCCCG AATTGCGATG
ATCTTAAAAG AAACTGGCAT GACTCCCTCG GATTTAGAGT TAGAAATTAC TGAAACGACA
GTCATGGAAA ATTTAGAGCA AATGACGGCT ATTTTAGAAC AACTGAAACA GATGGGAATC
AAAATCGCTA TTGATGATTT TGGGACGGGA TATTCTTCCC TAAATGTGCT TAAACATTTG
CCAGTTGATA CTCTCAAAAT TGATAAATCT TTTGTCCAAG ATATAACTTT AGATTCCAAC
GATGCTAAAC TTTGTCAAGG GATTATTATG CTCGGCAAAG CTTTTGAATT AGACGTTTTA
GCCGAAGGAG TCGAAACTTT CACCCAGTTA GAATTTTTAC GTTCTCTGAA CTGCGATCGG
GCACAAGGAT ATTTAATTAG TCGTCCTCTA GCCCCAGATG CGTTAATAGA ATTATTACTT
AAAGCTCAGA CCTTAATTCC TTCTCCCAGT AGTCAAGAGG TTAACCTTTT ACATTCATCC
TCACCGAGTT GGCCAAATTC TATTATTCCC AATTCTCCTC ATCAACTCGA CTATCATCCC
CCAATGATTG AAACCGGTTC ACCCTATATT AAAATAGAAA GTTTTGAAGC CAAAAATTCC
CAAAACCTTC AAGAATATCT CTATCTTAAA CAAGAAATTC AACAACAAGC CAATCGAGAA
AGAATCATCA TGGACGTGGC GCAAAAAATC CGCGCTTCCC TCAATCTCGA TGATATTCTC
AATACAACTG TCAGTGAAAT TCGCCATCTT CTCAATACCG ATCGCGTATT TATTTACCGT
TTTGATGAAA ATTGGGTCGG AAAAGTCGTC GTTGAATCCG TTGCTTGTCC TGAATTTTCC
ATTTTAGGAG AATGGATTGA TGAACCCTGT TTTCGAGATC AATATGTCAA ATATTATCGA
CAAGGACGAA TTAAAGCGAT CGAAGATATT GCTCAAATAG AACTGACTCC TTGTCATCGG
GAGTTACTTA ATCGTTATCA AGTTAAAGCG AATTTAGTCC TACCGATTGT TTATCAAGAT
AAATTATGGG GCTTATTAAT TGCCCATGAT TGTCGAAAAC CTCGTAAATG GCAAGATCAC
GAAATCACCT TACTATCTCA AATTGCTATT GGCGCGGCGA TCGCCATACA CCAAGGAGAA
CTCTATCAAC AACTCGAATC AGCCAATTTA GAATTAAAAA AACTCTCTTG TCTCGATGGA
TTAACTCAAG TCGCCAACCG TCACCGCTTT GATATGTATT TAGACCAAGA ATGGCGGAGG
TTAATGCGTT CCCAGCAGTT TTTATCCCTC ATTTTGTGTG ACGTAGACCA TTTTAAAGGG
TATAACGACA CTTACGGTCA TTTAGCGGGC GATCAATGTT TACAACAGGT GGCCCAAGTG
ATCAAAAATG CCGTAGGACG ACCGGCTGAT TTAGTAGCCC GTTATGGAGG AGAGGAATTT
GCCATTATTT TACCCGATAC CCCTTTAAGG GGAGCGTTAT ATGTCGCTGA ACAAATTCGA
CAACAAGTTC AATATTTAAC AATTCCTCAT CCCCAATCGA CCCATCAATG GGTTACTTTA
AGTTCAGGGG TAGCCAGTTT TATTCCTAGT GCTGCCCTTT CTCCTAAAGC GTTGATTAAT
GCTGCCGATG AAGCGCTTTA TCAAGCTAAA GCCAACGGAC GTAATCAAGT GGTTTTTAGT
CCTTCTTGA
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| Protein sequence | MNETNSNQEQ LLLKITNLIH HNLDFTDTIQ KITQAAQDFL KIDRVTIYQF AQDGSGEVIA
ESTTPTRLPS LLGLHFPASD IPSKSLEQFA KLRSSSIIDV SAKRKTINSF NEYSDGKSNT
LYIPTYSTVD PCHLQYLLAM GVLSSLSMPI FYWDQLWGLL IAHHSEPRRF SREELWTIEL
WCRQISLALA QNTLVSQFQK QKQQEHFIET INRLIDNQSN LSECWQKILL ETLKTLQADG
ARLYIVSELT GQGDQLYTYG SQPLFPQLEE QPQWQQLMKG KLSQPDDSSY PSTRPFTCTL
AQLSADPQYH LLSKAFGNQS IQSFLFIPLR SRSQWVGCLT LFRQEQEWET LWAGQQKLDQ
HNSTPRQSFS PWCEIQRGVR EWSTDELKLA EVLGLHLYMI VIQQRLTRLI RHQASYDVIT
QLPNGIIFNH RLSLALVDAV NQGNMLGVVI LDLNQFKRIN DSLGHGVGDF LLTKVRDRLQ
NALDTYSIFN PLLARWHGAR FIILLSKLSY SDESVMVCQK LLNDFQEPFY VQSQAIYLGA
SLGIALAPYD GDTAEILLKN AESAMYEAKK QGKNTYQIYR PGSDHDKNKL ILEADLRKAI
ERNEFVLHYQ PQIDLNTRKL IGVEALIRWQ HPSLGMVSPA LFIPLAEETG LICPLGEWVL
RTACHQYRIW QKAGFPKIQM AVNLSAFQLQ QDDIVARIAM ILKETGMTPS DLELEITETT
VMENLEQMTA ILEQLKQMGI KIAIDDFGTG YSSLNVLKHL PVDTLKIDKS FVQDITLDSN
DAKLCQGIIM LGKAFELDVL AEGVETFTQL EFLRSLNCDR AQGYLISRPL APDALIELLL
KAQTLIPSPS SQEVNLLHSS SPSWPNSIIP NSPHQLDYHP PMIETGSPYI KIESFEAKNS
QNLQEYLYLK QEIQQQANRE RIIMDVAQKI RASLNLDDIL NTTVSEIRHL LNTDRVFIYR
FDENWVGKVV VESVACPEFS ILGEWIDEPC FRDQYVKYYR QGRIKAIEDI AQIELTPCHR
ELLNRYQVKA NLVLPIVYQD KLWGLLIAHD CRKPRKWQDH EITLLSQIAI GAAIAIHQGE
LYQQLESANL ELKKLSCLDG LTQVANRHRF DMYLDQEWRR LMRSQQFLSL ILCDVDHFKG
YNDTYGHLAG DQCLQQVAQV IKNAVGRPAD LVARYGGEEF AIILPDTPLR GALYVAEQIR
QQVQYLTIPH PQSTHQWVTL SSGVASFIPS AALSPKALIN AADEALYQAK ANGRNQVVFS
PS
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