| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3633 |
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| Symbol | ispD |
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| ID | 7107508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 4062794 |
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| End bp | 4063483 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643481868 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002378887 |
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| Protein GI | 218440558 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATCTAT TAATTCCCGC AGCCGGTATG GGAAAACGGA TGGGAAGCGA TCGCAATAAA
CTTTTACTCA CCCTGATGGG TAAACCCTTA TTAGCCTGGA CATTACAAGC AGCAGAAGCG
TCTCAAAAAA TAACTTGGAT TGGAGTAATA GGACAATCCT ATGACTTTCC TGATTTTAAA
ACAATGATTA GCCAAGTGTC TTTGACTAAA CCCGTCCAAT TGATCCAAGG GGGAGATACT
CGTCAAGAAT CAGTATACAA CGGCTTACAA GCTTTACCCT CTGAGGCAAA AAGGGTATTA
ATTCATGATG GGGCCCGATG TTTAGCCACT CCGGAATTAT TCGATCGCTG TGCAGAAGCA
TTACTCAATT GTCAAGGACT AATTGCAGCC ATCCCGGTTA AAGATACGAT CAAAATTGTT
GATGATAAGG GTTATATTCA AGATACCCCC GATCGTCGCC AATTGTGGGC GGCTCAAACT
CCCCAAGGAT TTGAAGTAGA GTTATTAAAG CATTGTCACG CTCAAGGACG AACATTAGGA
TGGGAAGTCA CCGATGATGC GGCTTTATTT GAAAAATGCC AATTCCCTGT CCAAATTGTA
GAAGGAGAAG AAACTAATCT GAAAGTGACT ACACCGGTTG ATTTGACTAT TGCTGAATTT
ATTCTCCGTC AACGTTTAAC TCCTCAATGA
|
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| Protein sequence | MYLLIPAAGM GKRMGSDRNK LLLTLMGKPL LAWTLQAAEA SQKITWIGVI GQSYDFPDFK
TMISQVSLTK PVQLIQGGDT RQESVYNGLQ ALPSEAKRVL IHDGARCLAT PELFDRCAEA
LLNCQGLIAA IPVKDTIKIV DDKGYIQDTP DRRQLWAAQT PQGFEVELLK HCHAQGRTLG
WEVTDDAALF EKCQFPVQIV EGEETNLKVT TPVDLTIAEF ILRQRLTPQ
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