Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3632 |
Symbol | |
ID | 7107507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 4061209 |
End bp | 4062729 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643481867 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_002378886 |
Protein GI | 218440557 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02730] carotene isomerase [TIGR02734] phytoene desaturase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAACA CTCAAAATAC AAGTTTAGAT GTCATTATTA TTGGCAGTGG GATCGGAGGA TTAACCGCAG GAGCTTTATT AGCTAGATAT GGTAAAAAAG TCTTGATCTG TGAAAGTCAT TCTATCCCTG GAGGAGCGGC TCATAGTTTT TCTCGTCAAG GGTTTAAGTT TGATTCTGGG CCGTCTTTTT ATTGTGGTTT AGGAAATCAA CGTCCTAGTC TTAATCCTCT TAAACAGGTG CTTGATTTAA TCGGGGAATC TCTCGATGTT GTGCCTTATG ATCCTCTAGG ATTTTATCAT TTTCCTGATG TTACTTTACC GATTTATAGT GATTTAAATG CCTATCGTCA AGCCATCGCT AAGATTACTC CTGGAGGAGC AATAGAGTTA GAACGATTTG AAAATCGTCT TTTATCTCTT TATGATTGTC TGAAAGATAT TCCGTCTATT AGTTTACGGT CTGATTGGCA AATACTCCCT CTTTTAGTTT TAAAATATGG AGGGAGTTTA ATTAAGTTTT TGCCTCAATT ATCTATCATT AATGGCTCAG TCGGTCAAAT TATGGATCAA TACATCCAAG ATCCTTGGGT GAGAAGATTA ATTGATCTAG AATGTTTTTT ATTATCCGGA TTAAAAGCTC AGGGAACAAT TGCCCCAGAA GTGGCTTTTA TGTTAGGAGA ACGTAACCGC GCCGGCGTAG AATATCCCAA GGGGGGAAGT GAGGCAATTG TTAATGCTTT GGTAAGAGGG TTTAAGCGGT GGGGGGGAGA GTTACGTTTA AAAAGTCATG TTGATAAAAT ATTAGTGGAA AAGGGGAAAG TTGCCGGAAT TAAATTAAAC AAGGGAGAAA TAATTAAAGC TAAGATTGTA ATTTCTAATG CCAGTCTTTG GGATACCTAT AGTCAGTTAT TAAATCCGGA AGATTTACCA GCAGATTACC GTGTTCAGAG CTTAAAAACG CCAACGGTTG AGAGTTTTAT GCACCTTCAT CTAGGGATTA AATCGGATGG ATTAGAAGGA TTAACCGGGC ATCATGTCGT GGTTCATGAT GAGAGAAAAG ATATTAGTGA GCCGGGGAAT ACTTGTATGA TTTCTATTCC CTCAGTTTGG GATAAAACTC TAGCTCCGGA AGGCCATCAT GTCATTCATG CTTATACTTT AGAACCTTGG CAAGGATGGG AAAGAAATGA ACATTATGAA GAGAAGAAAA AAGAGCGATC GCAATCTTTA TATAAAGCCT TAGAAAAAGT TATTCCTGAT ATTCGTCAAC GAGTCACATT AGAATTAATA GGAACTCCTT TAACTCATGC CTATTATTTA CGACGATATC AAGGAACTTA TGGCCCTGCT ATTGCAGCAG AAAACGGGTT ATTTCCCAGT TGTTATACTC CCATTTCTGG ATTATATCGG GTGGGGGATA GTACCTTACC CGGAATCGGT GTTCCGGCGG TGGCAGCATC AGGTATTTTA TGTGCAAATA CCCTTGTTCC TTTGGCTAAA ATTTGGGAGT TAATTCATTA A
|
Protein sequence | MSNTQNTSLD VIIIGSGIGG LTAGALLARY GKKVLICESH SIPGGAAHSF SRQGFKFDSG PSFYCGLGNQ RPSLNPLKQV LDLIGESLDV VPYDPLGFYH FPDVTLPIYS DLNAYRQAIA KITPGGAIEL ERFENRLLSL YDCLKDIPSI SLRSDWQILP LLVLKYGGSL IKFLPQLSII NGSVGQIMDQ YIQDPWVRRL IDLECFLLSG LKAQGTIAPE VAFMLGERNR AGVEYPKGGS EAIVNALVRG FKRWGGELRL KSHVDKILVE KGKVAGIKLN KGEIIKAKIV ISNASLWDTY SQLLNPEDLP ADYRVQSLKT PTVESFMHLH LGIKSDGLEG LTGHHVVVHD ERKDISEPGN TCMISIPSVW DKTLAPEGHH VIHAYTLEPW QGWERNEHYE EKKKERSQSL YKALEKVIPD IRQRVTLELI GTPLTHAYYL RRYQGTYGPA IAAENGLFPS CYTPISGLYR VGDSTLPGIG VPAVAASGIL CANTLVPLAK IWELIH
|
| |