Gene PCC7424_3588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3588 
Symbol 
ID7107462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3999938 
End bp4001011 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content40% 
IMG OID643481825 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002378844 
Protein GI218440515 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.143432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAT CCGTTACACC TTTTACCGTT CATAAACGCT TTGCTCTGAC TATCAGTCGG 
GGAACGAGTA GTGAAAATAC TAATCTTTGG GTACGAATTG AAGATCAAGG AATAGAAGGG
TGGGGAGAAG TCACCGCCTT TTCTATTACC CAAGAAGGAT ACAATAATAC AGACAGATTG
TTTCAAGAAA TAGAAGAACT CATTCCTAGT TTAAGACAAT TTAGCCCCTT AGATCGTCAA
CAAATCGAAA CTTTTTTAAG AGAAAACCAA ATTTCTAGGG CAGTACGGGC GGGCATTGAT
ATCGCATTAT ATGATTGGTT AGGAAAAAAA GCTCATTTAC CTCTGTGGCA ATTATGGGGA
CTCGATCGCA GTCGTATTGT TCCCACTTCG GTGACAGTGG GGATAAGTTC ACCGGAAGAA
GCTCGAACTA GAGTGAGAAA CTGGACAGAA ATTATAGATG TTAAAATAGT TAAGGTTAAA
TTAGGCTCAC CAGAGGGAAT TGAAGCCGAT CAACGGATGT TATTAGCCAT TCGAGAAGAA
CTCCCTAAAG CTAGACTGAC AGTAGATGCT AATGGGGGAT GGAATCTAGA AAATTCCTTG
AAAATGTGTT ACTGGTTGGC ACAACAAGGG GTAGAATATG TCGAGCAACC GTTAGCCGTA
GGAGAGGAAG AAAAGTTATC TTTATTATAT CCGCGATCGC CGCTCCCTAT CTTTGTGGAT
GAAAGTTGTT TTACCAGTGA AGATATACCG AAGTTAGCCT CCCGTGTTGA TGGAATTAAT
ATTAAAATTA TGAAAGCCGG GGGATTAACT GAAGTGATGC GGATGATTGA TGTGGCTAAA
GGATGTCGGT TAAAAGTGAT GTTTGGTTGT TATTCTGATA GTAGTTTAGC TAATACGGCG
ATGTGTCATT TAGCTCCTTT GGCCGATTAT TTAGATTTAG ATAGTCATCT AAATTTAATT
GACGATCCAT TTACTGGGGT AACGTTAGAA CAAGGCCGTT TACTCCCTAA TGATTTACCC
GGTTTAGGAA TTCAGTTAAC CGTTCAGAGG AACGGGAAAA AAACTAATAA CTAA
 
Protein sequence
MELSVTPFTV HKRFALTISR GTSSENTNLW VRIEDQGIEG WGEVTAFSIT QEGYNNTDRL 
FQEIEELIPS LRQFSPLDRQ QIETFLRENQ ISRAVRAGID IALYDWLGKK AHLPLWQLWG
LDRSRIVPTS VTVGISSPEE ARTRVRNWTE IIDVKIVKVK LGSPEGIEAD QRMLLAIREE
LPKARLTVDA NGGWNLENSL KMCYWLAQQG VEYVEQPLAV GEEEKLSLLY PRSPLPIFVD
ESCFTSEDIP KLASRVDGIN IKIMKAGGLT EVMRMIDVAK GCRLKVMFGC YSDSSLANTA
MCHLAPLADY LDLDSHLNLI DDPFTGVTLE QGRLLPNDLP GLGIQLTVQR NGKKTNN