| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3572 |
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| Symbol | |
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| ID | 7112185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 3973796 |
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| End bp | 3976504 |
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| Gene Length | 2709 bp |
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| Protein Length | 902 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643481810 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002378830 |
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| Protein GI | 218440501 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
[COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT ATGCTTTAGT GGTAGGTATT ACTCAATATG ATGAATTGAA CTCATTAAAA
AAACCTGCTG AAGATGCAGA AGCGGTTGCC AAGGTTTTAG AAGAATGGGG AAATGTTCAG
GACGTTAAGC GCTTACCCGA ACATTGGAGC GGCGATCGCT ACGAAGTTGG CAAAAACAAA
CTGACGGGAA AAGTATTAAT TGAAGCTTTA AGAAAATTTC TTTTAGAGCA AGCAGTTAAT
AGTGAAGCTT TAATATATTT TAGTGGTCAT GGTGTAGCAA TTTTAGAGTC TCTCAGTCAA
CAACGAGAAG GATATTTAGC CGCCTCTGAT TGTAGAATAA TCCGCGATTC TAAAACAATC
ATCGGACAAC AGAATGGCAT TTCGTTGCGG GGACTAAACA ATTTAATTTT GCAATCACAG
GTTAGTAGTT TAGTTGTCAT TCTTGATTGT TGTCATGCGG GGACTTTTTT AGATAAAGAT
TTAGTTAAAC AGACTCTTAC TGCTTTTCAG TCATCAGAAA GAGATTATTA TTTAATGGCG
GCTTGTCGTT CAAATGAGCA AGCATGGGAA GGAGAAAATT ACAGTATTTT TACCGAAGCG
TTATTACAAG GATTATCTCA AAACAATGCT AGAAGTGATG GGGTTATTAG TTGCGATAGA
ATGGCTGATT TTATTGATAA AGAACTGAAA CACTCAGGAC AAGAACCAAT TCGACTAGGG
TTAGGAAGAT CTATTACTTT AGTTAAATAT CAAACTAATA TAAAAATTCC TATAGTTGTT
TCTGAAGACT GTCCTTATCA AGGGTTGAGG TACTTTACCA AAGATAAAGC GAACTTCTTT
TTTGGACGTG ATAAAGTTGT TTATCAGTTA AGACAAAAAT TAGAAACCTC TTCGTTTATT
CCTCTCATTG GTGTGTCAGG AAGTGGCAAA TCTTCTGTTG TTCGGGCGGG GTTAATTCCT
CTGTTGGAAA AAGAGATGTT AATAAATGGC GCTTCTAGAT GGAATATTTT AGAATCGATT
AAACCGGGAT TTTCTCCTTT AAGCTCATTA GCCATCGTTT TTCAAGCTTT TTTCCCTCGT
ACTAGACAGG GAAATACAAA TATCAAACAA CTGATTTATC ACGACTTTAA TGGGTTAGAG
TCTCTTAAAA ATTTTTGTTG TGAAGAAGAA AAATATTTAT TATTAATTGA TCAGTTTGAA
GAAATTTTTA CTCTTTGTAG TGATGAAGAA GAACGTCAGA GGTTTATTGA TTTAATTACC
CAAGTCGTTG AGATTCCTAA TTGTCCCTTG GTTATTATTA CTACTATGAG AGCGGATTTT
ATCGAACCTT GTCTCAGTTA TCCTAACTTA CATCAACTTA TTCAAACTTC TGCTATTTAT
ATGCCTCCGT TAACTGGAAA AGATTTAAGA GCAGTCATTA TAGAACCGGC TAAACTACAA
GGTCATAATC TTGAGGACGA GTTAATATTA GAAATTGTAC AAGATCTAGG GAGAGAACCT
GGATTATTAC CTTTATTAGA ATTTGCTTTA ACAAAGTTAT GGGATGAACG AGATATAGAA
AAACATTCAT TAACTTTAGA ACAATACCAA AAAATAAAAG GAGTTAAAGG GGCATTAAAT
CATCACGCTG AAAAAGTTTA TTGTTATAAA GATTTTGAGA AAGAAAATCC TACACAAAAA
CGAGATAACC AACAAAAAAA CTGGATAAAA CGCATTTTTT TGAGATTGAT AAGAACGGGT
ACTGGAAATA AAGATACTCG TCAGCGAGTT TTGAAAGCAG AATTATTAAT GCTTGATGGA
GAAGATAGGG AGAAACAAGA AGCATTAAGA GAATTGTTAG AAGATGAAGG GGGTTTAGTA
TGCGGACGAT TGATTGTATC TGGACAAGAT CGAGAAAATT CAGAACCTTG GATAGATCTT
GCTCATGAAG CATTAATTGA AGGGTGGGAT ACATTGGTTA AATGGCGTGA AGAAAGTAGA
GACTTACGCC GGTTAATTGA TGAGGTAAGA GATGCACATC AAAAGTGGAT AAGCAAGGGG
AAAAATGATA AATATTTAAT GATGGGAGGA TTATTGGATG AAGTTAAAGC AATTTGGGAG
GCTCATAAGT TAGCAAAAGA GTTTCCATTT TTACAAAAAT TTTATGAACA AAGTTTAGAA
CGTGAAGAAA TAGAATTTGA ACAATTATAT TTTTTCTTTA ATTTTGATTC TTTAACTGGT
CTATTCAATC GTCGCAGGTA TGATGAAAAA TTACAAAAAG CATGGGACAA ATGTAAGCAA
GAACAAAAGC CCTTATCACT TATTCTTGCA GATATTGATT ATTTCAAAAT TTACAATGAT
ACCTATGGAC ATCTTGTAGG AGATGAATGT TTAAAAAAAA TAGCACAAAT GCTGAAAAAA
TCAATTAATA TTTTTGATGA TTTGCCTATT GTCGCACGTT ATGGAGGTGA AGAATTTTCA
ATCATTTTAC CTGAATATGG ACAAGAAAAA TCTATACAAG TTGCTAAAAA AATAATGAAT
GAACTACAGT TATTAAAAAT TACTTACTCT AGTTCTCCTC TTAGCGATTA TATGACTTTA
TCTCTAGGAA TTGCTTGTAC TATTCCTAAT AAAAACTCCT CTCCAGATCG ACTACTTAGT
GTTGCTGATC AAGCTTTGTA TAGAGCAAAA GTCGAGGGAC GTAATCGATT TATAGTTGAA
GAATTCTAA
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| Protein sequence | MKRYALVVGI TQYDELNSLK KPAEDAEAVA KVLEEWGNVQ DVKRLPEHWS GDRYEVGKNK
LTGKVLIEAL RKFLLEQAVN SEALIYFSGH GVAILESLSQ QREGYLAASD CRIIRDSKTI
IGQQNGISLR GLNNLILQSQ VSSLVVILDC CHAGTFLDKD LVKQTLTAFQ SSERDYYLMA
ACRSNEQAWE GENYSIFTEA LLQGLSQNNA RSDGVISCDR MADFIDKELK HSGQEPIRLG
LGRSITLVKY QTNIKIPIVV SEDCPYQGLR YFTKDKANFF FGRDKVVYQL RQKLETSSFI
PLIGVSGSGK SSVVRAGLIP LLEKEMLING ASRWNILESI KPGFSPLSSL AIVFQAFFPR
TRQGNTNIKQ LIYHDFNGLE SLKNFCCEEE KYLLLIDQFE EIFTLCSDEE ERQRFIDLIT
QVVEIPNCPL VIITTMRADF IEPCLSYPNL HQLIQTSAIY MPPLTGKDLR AVIIEPAKLQ
GHNLEDELIL EIVQDLGREP GLLPLLEFAL TKLWDERDIE KHSLTLEQYQ KIKGVKGALN
HHAEKVYCYK DFEKENPTQK RDNQQKNWIK RIFLRLIRTG TGNKDTRQRV LKAELLMLDG
EDREKQEALR ELLEDEGGLV CGRLIVSGQD RENSEPWIDL AHEALIEGWD TLVKWREESR
DLRRLIDEVR DAHQKWISKG KNDKYLMMGG LLDEVKAIWE AHKLAKEFPF LQKFYEQSLE
REEIEFEQLY FFFNFDSLTG LFNRRRYDEK LQKAWDKCKQ EQKPLSLILA DIDYFKIYND
TYGHLVGDEC LKKIAQMLKK SINIFDDLPI VARYGGEEFS IILPEYGQEK SIQVAKKIMN
ELQLLKITYS SSPLSDYMTL SLGIACTIPN KNSSPDRLLS VADQALYRAK VEGRNRFIVE
EF
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