Gene PCC7424_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3540 
Symbol 
ID7112153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3942686 
End bp3943174 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content42% 
IMG OID643481778 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_002378798 
Protein GI218440469 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.00955446 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGATAAAT ATATCTCTCA ATTAGATGAG CAAACCTATT TAGATCATAA ACGATGGATG 
AGCCGAGCGA TCACTTTAGC TCAGGAAGCG GCACAAGCAG GAGATGTTCC TGTCGGTGCT
GTTATCATAG ACGAAAAAGG GAAATTAATC GCCGAAGGAT CTAATCGAAA AGAACGAGAT
CAAGATCCTA CCGCCCATGC AGAAATAATT GTTCTGCGTC GTGCTAGTCA AGTTTTACAA
ACATGGCATT TACAACAGTG TAAGCTGTAT GTTACCCTCG AACCCTGTCC TATGTGTACC
GGGGCAATTA TTCAGGCTAG GATCGCATTA TTAATTTATG GGGTTGATGA TCCCAAAACG
GGAACTATCC GCACCGTTGC TAATTTGCCG GATAGTCCCT GTTCTAATCA TCGATTATCG
GTGATTTCTG GGATTATGGA ATCTGCTTGT CGACACCAAT TACAAACTTG GTTTGCTCAA
AAACGATAA
 
Protein sequence
MDKYISQLDE QTYLDHKRWM SRAITLAQEA AQAGDVPVGA VIIDEKGKLI AEGSNRKERD 
QDPTAHAEII VLRRASQVLQ TWHLQQCKLY VTLEPCPMCT GAIIQARIAL LIYGVDDPKT
GTIRTVANLP DSPCSNHRLS VISGIMESAC RHQLQTWFAQ KR