Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3540 |
Symbol | |
ID | 7112153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 3942686 |
End bp | 3943174 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643481778 |
Product | CMP/dCMP deaminase zinc-binding |
Protein accession | YP_002378798 |
Protein GI | 218440469 |
COG category | [F] Nucleotide transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0590] Cytosine/adenosine deaminases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.00955446 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGGATAAAT ATATCTCTCA ATTAGATGAG CAAACCTATT TAGATCATAA ACGATGGATG AGCCGAGCGA TCACTTTAGC TCAGGAAGCG GCACAAGCAG GAGATGTTCC TGTCGGTGCT GTTATCATAG ACGAAAAAGG GAAATTAATC GCCGAAGGAT CTAATCGAAA AGAACGAGAT CAAGATCCTA CCGCCCATGC AGAAATAATT GTTCTGCGTC GTGCTAGTCA AGTTTTACAA ACATGGCATT TACAACAGTG TAAGCTGTAT GTTACCCTCG AACCCTGTCC TATGTGTACC GGGGCAATTA TTCAGGCTAG GATCGCATTA TTAATTTATG GGGTTGATGA TCCCAAAACG GGAACTATCC GCACCGTTGC TAATTTGCCG GATAGTCCCT GTTCTAATCA TCGATTATCG GTGATTTCTG GGATTATGGA ATCTGCTTGT CGACACCAAT TACAAACTTG GTTTGCTCAA AAACGATAA
|
Protein sequence | MDKYISQLDE QTYLDHKRWM SRAITLAQEA AQAGDVPVGA VIIDEKGKLI AEGSNRKERD QDPTAHAEII VLRRASQVLQ TWHLQQCKLY VTLEPCPMCT GAIIQARIAL LIYGVDDPKT GTIRTVANLP DSPCSNHRLS VISGIMESAC RHQLQTWFAQ KR
|
| |