Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3523 |
Symbol | |
ID | 7112135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 3917560 |
End bp | 3920799 |
Gene Length | 3240 bp |
Protein Length | 1079 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643481762 |
Product | diguanylate cyclase with PAS/PAC and GAF sensors |
Protein accession | YP_002378783 |
Protein GI | 218440454 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCATT CTCAGCGACT GAGCTTATCA ATTCTCAAAA TGACGGCCAT TTGTTTGATT GTGGCAGCAA TAGGGATTTA TAGTCTCTAT CAAAGCTCCT TTAAGCAACA CAAACAATGG TTAGTAGAAA CAACCCAAAA TCAGGCTAGG TTAATTGAGG CGATCGCAGA AAATTCTGAC AATCCCCAAA TTGCCCTAGA AACTGTTTTA GATCAATCTG AAAAATTTCC CGGATTAATT CACCCGTTTG ATTTAATCCT AATTCAACGA GAAAACCAGC AAATTTTCTT TTTAAGATTC GATGAGGAGA ATAATAAAAT TGATTTTCAG AGCGTACCTT GGCAGAGGAA ACTATCTGGA GAATCAGAAA CTTTTATAGA AGACTATTTA GGGGTTAAAG TTTTAGCCGC CTATGAACCC ATTGAGCCAT ATAATTGGGG TATTATCGCT CAAATCCCTC TTAATCAAAT TCGCGCTCCT TTTTTGATGG CCGGATTATA TACTCTTTTG GCTGCCCTAA TCGTTAATAG TTTGAGTGGT ATTTTAGGGT TAAGACTTGG CAGTTCCAGG GGTGAGCAAA TAGAAGAAAA TGAGGCTCTT AATGAAGCGA ATGAACAATT ACGCCGAGAA ATAAATCAAC GAGAGCGTTT TGAAACCGCT TTACGCCGGG AAATAGACTT ATTAGCCCGA ATTATGGAAA CTAGCCCTGT GGGAATTATG ATGGTTAATT CACAAGGGGA GATTATCTTG GCCAGCGAGC AAGCGGAGCA AGTTTTAGGA CTATCCTTAA CCCAAACTGA GCAACCCTAC AATATTTTAG AGTGGAGAAT TAGCGATGAA GAAGGGAATT CCCTACCCCC TGAAGACTCG CCTTTTCAAG GGGTGATCCG AACTGAGCAA TCTATATCTC GTGTTCGTTA TTGGATAGAA TTACCCAATG AACAAAACAT ATTAGTCTCG ATTAGTGCTT CCCCTTTATT AAATACAGAA AATCAAATCC AAGGAGTTGT TTTAACCCTA GAAGATATTA CCGAACGAGT TCAAGTGGAA TCCGCTTTAA TTCATAGTGA AGCTCAATTT CGGGCAATTT TTGAACAGGC CGCCGTAGGA ATTGGGATTG TCAGTTTATC GGGTCAATAT ATTCGGGTTA ATCAACGTTA TTGTGAGTTA GTTGGATATT CTCAAAAAGA ACTTTTATTA AAAACCTATC AAGAAATTAC TCATCCTGAC GATTTATCAA AAAATCTAGA GTTAGTGAGT CATTTATTAT TAGGAGAAAT CCAAACCGGT TCTATAGAAA AACGTTATAT TTGTAAAAAT GGTCAAATTC AATGGGTCAA TTTAACCGCC TCTACTGTAT CTGATGCCCA GAATAATCCA GAATATTTAA TTGGTATTGT TGAAGATATT TCTGAGCGTA AACGGGCTGA GGAAGCCTTA CGAGATTCTG AAGAACGATT TCGTAGTATT TTTAAACAAG CTGCGGTAGG CATTGTTCAA GTCTCTTTAT CGGGGAAATT TATCTTAGTT AATGATAAAT TTGTTGATCT TGTTCAATAT TCGGTAGCCG AATTACAAGA AAAAACTTTT CAAGAAATTA CTCATTCCGA TGATTTACCC CAAGAACTCA ATTATATTCA ACAAATGCTG AGGGGAGAGA TTGATGATTT TTCTTTAGAA AAACGTTATA TCTGTAAAGA TGGGTCTCTA GTTTGGGGAC ATTTAAGCGG TTCTCTAGTT CGCAATACTG AGGGAGAACC GATGTATTTT ATTGGGATTA TCGAAGATAT TAGAGAACGG AAACAAGCCA TAGAAGATTT ACGGCAAAGT GAAGAACAAT ATCGTCGTAT TATTGAAACT ACTGCCGAAG GAGTTTGGAT TATCGATCAG GAGAATAAAA CGACTTTTGT TAATCATAGA ATGGCGCAAA TGTTAGGATA TACCATCGAC GAAATGAAAG GGAAATCTAT GTTAGATTTT GTGGATGCTC AAGAACAAGA AATGGTGGCT AATCATATTG AACGTCGTCG TCAAGGAGTA ATGGAATATA GAGATTTTAA ATTTATTCGC AGCGACGGAA ATTATTTATG GGCAATGATC GCCACTAATC CAATTTATGA TTCTGTGGGG CATTATGTGG GCGCGTTAGG AATGTTAACG GATATTACCG AACGCAAACA AACCGAGGAA ACGTTACAAC AAGTCAATGA ACAATTAACC GCTAGAGTCT CCGAACTTGA ACAACGACAT CAAGATATTT TATTACTGAA TCAGGTGAAT GATTTTCTCC AAGCTTGTCT GAATATTAAA GAAGCTTATC AAGTGATTGG GGAGTTACTT CAACCGTTAT TTCCCGGATG TTCTGGCGGG TTATATATGC TCAATAGTTC TAAAACGGTA GTCGAAGAGG TTGCTACTTG GGGAGAACAT TTATCGAGCA AAAATTTATT TACTTTTGAT GAATGTTGGG CTTTACGACG AGGTTATATT CATTGGGTTA AACCCTCTCA ACGGAGTTTA TTTTGTACTC ATACTCACGT TACCCCTGAC TTAGTTGAAA CTCTTTGTGT GCCGATGATG GCTCAAGGGC AAGCGGTAGG ATTATTCTAT TTAAGTGCTT CAGAACCAGA CAAATTAAGC GAAGTTAAAC AACAGTTAGC TAGGGCGGTT TCTGAACATA TTTCTTTGGC TTTGGTTAAT TTACAATTGC GGGAATCTCT TAAAGCTCAA AGTATTAAAG ATTCTTTAAC TGATTTGTAT AATCGTCGTT ATATGGAAGA ATCTCTAAAA CGAGAAATTA GTTTAGCTCA ACGCAAACAA CATTCAGTCG GATTAATTAT GATTGATGTC GATCATTTTA AGGAATTTAA TGATACTTTT GGTCATAAAG CCGGAGATTT GGTCTTACAA GAAGTCAGTA ACTTTCTGAT GATTAATGTC CGCAGTGGTG ATATTGCTTG CCGTTATGGA GGTGAAGAGT TTCTTTTAAT TTTACCTGAA GCTTCTTTAA CGGATAGTCA ACAACGAGCG GAACAAATTA GACAGGGAAT TAAACAACTT GATTTTAAAC GTTATGACCA ATCTTTTCGC TCTGTTACGG TTTCTGTAGG AGTGGCAAGT TTTCCCGATC ATGGTACTAA TAATGATCAG TTAATTCAGG CTGCTGATAC GGCTTTATAT CAAGCTAAAA AACAAGGCCG CGATCGCGTT GTCGTTTTCT CTCCTTTTAT GGAAATGTAA
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Protein sequence | MNHSQRLSLS ILKMTAICLI VAAIGIYSLY QSSFKQHKQW LVETTQNQAR LIEAIAENSD NPQIALETVL DQSEKFPGLI HPFDLILIQR ENQQIFFLRF DEENNKIDFQ SVPWQRKLSG ESETFIEDYL GVKVLAAYEP IEPYNWGIIA QIPLNQIRAP FLMAGLYTLL AALIVNSLSG ILGLRLGSSR GEQIEENEAL NEANEQLRRE INQRERFETA LRREIDLLAR IMETSPVGIM MVNSQGEIIL ASEQAEQVLG LSLTQTEQPY NILEWRISDE EGNSLPPEDS PFQGVIRTEQ SISRVRYWIE LPNEQNILVS ISASPLLNTE NQIQGVVLTL EDITERVQVE SALIHSEAQF RAIFEQAAVG IGIVSLSGQY IRVNQRYCEL VGYSQKELLL KTYQEITHPD DLSKNLELVS HLLLGEIQTG SIEKRYICKN GQIQWVNLTA STVSDAQNNP EYLIGIVEDI SERKRAEEAL RDSEERFRSI FKQAAVGIVQ VSLSGKFILV NDKFVDLVQY SVAELQEKTF QEITHSDDLP QELNYIQQML RGEIDDFSLE KRYICKDGSL VWGHLSGSLV RNTEGEPMYF IGIIEDIRER KQAIEDLRQS EEQYRRIIET TAEGVWIIDQ ENKTTFVNHR MAQMLGYTID EMKGKSMLDF VDAQEQEMVA NHIERRRQGV MEYRDFKFIR SDGNYLWAMI ATNPIYDSVG HYVGALGMLT DITERKQTEE TLQQVNEQLT ARVSELEQRH QDILLLNQVN DFLQACLNIK EAYQVIGELL QPLFPGCSGG LYMLNSSKTV VEEVATWGEH LSSKNLFTFD ECWALRRGYI HWVKPSQRSL FCTHTHVTPD LVETLCVPMM AQGQAVGLFY LSASEPDKLS EVKQQLARAV SEHISLALVN LQLRESLKAQ SIKDSLTDLY NRRYMEESLK REISLAQRKQ HSVGLIMIDV DHFKEFNDTF GHKAGDLVLQ EVSNFLMINV RSGDIACRYG GEEFLLILPE ASLTDSQQRA EQIRQGIKQL DFKRYDQSFR SVTVSVGVAS FPDHGTNNDQ LIQAADTALY QAKKQGRDRV VVFSPFMEM
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