Gene PCC7424_3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3523 
Symbol 
ID7112135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3917560 
End bp3920799 
Gene Length3240 bp 
Protein Length1079 aa 
Translation table11 
GC content37% 
IMG OID643481762 
Productdiguanylate cyclase with PAS/PAC and GAF sensors 
Protein accessionYP_002378783 
Protein GI218440454 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATT CTCAGCGACT GAGCTTATCA ATTCTCAAAA TGACGGCCAT TTGTTTGATT 
GTGGCAGCAA TAGGGATTTA TAGTCTCTAT CAAAGCTCCT TTAAGCAACA CAAACAATGG
TTAGTAGAAA CAACCCAAAA TCAGGCTAGG TTAATTGAGG CGATCGCAGA AAATTCTGAC
AATCCCCAAA TTGCCCTAGA AACTGTTTTA GATCAATCTG AAAAATTTCC CGGATTAATT
CACCCGTTTG ATTTAATCCT AATTCAACGA GAAAACCAGC AAATTTTCTT TTTAAGATTC
GATGAGGAGA ATAATAAAAT TGATTTTCAG AGCGTACCTT GGCAGAGGAA ACTATCTGGA
GAATCAGAAA CTTTTATAGA AGACTATTTA GGGGTTAAAG TTTTAGCCGC CTATGAACCC
ATTGAGCCAT ATAATTGGGG TATTATCGCT CAAATCCCTC TTAATCAAAT TCGCGCTCCT
TTTTTGATGG CCGGATTATA TACTCTTTTG GCTGCCCTAA TCGTTAATAG TTTGAGTGGT
ATTTTAGGGT TAAGACTTGG CAGTTCCAGG GGTGAGCAAA TAGAAGAAAA TGAGGCTCTT
AATGAAGCGA ATGAACAATT ACGCCGAGAA ATAAATCAAC GAGAGCGTTT TGAAACCGCT
TTACGCCGGG AAATAGACTT ATTAGCCCGA ATTATGGAAA CTAGCCCTGT GGGAATTATG
ATGGTTAATT CACAAGGGGA GATTATCTTG GCCAGCGAGC AAGCGGAGCA AGTTTTAGGA
CTATCCTTAA CCCAAACTGA GCAACCCTAC AATATTTTAG AGTGGAGAAT TAGCGATGAA
GAAGGGAATT CCCTACCCCC TGAAGACTCG CCTTTTCAAG GGGTGATCCG AACTGAGCAA
TCTATATCTC GTGTTCGTTA TTGGATAGAA TTACCCAATG AACAAAACAT ATTAGTCTCG
ATTAGTGCTT CCCCTTTATT AAATACAGAA AATCAAATCC AAGGAGTTGT TTTAACCCTA
GAAGATATTA CCGAACGAGT TCAAGTGGAA TCCGCTTTAA TTCATAGTGA AGCTCAATTT
CGGGCAATTT TTGAACAGGC CGCCGTAGGA ATTGGGATTG TCAGTTTATC GGGTCAATAT
ATTCGGGTTA ATCAACGTTA TTGTGAGTTA GTTGGATATT CTCAAAAAGA ACTTTTATTA
AAAACCTATC AAGAAATTAC TCATCCTGAC GATTTATCAA AAAATCTAGA GTTAGTGAGT
CATTTATTAT TAGGAGAAAT CCAAACCGGT TCTATAGAAA AACGTTATAT TTGTAAAAAT
GGTCAAATTC AATGGGTCAA TTTAACCGCC TCTACTGTAT CTGATGCCCA GAATAATCCA
GAATATTTAA TTGGTATTGT TGAAGATATT TCTGAGCGTA AACGGGCTGA GGAAGCCTTA
CGAGATTCTG AAGAACGATT TCGTAGTATT TTTAAACAAG CTGCGGTAGG CATTGTTCAA
GTCTCTTTAT CGGGGAAATT TATCTTAGTT AATGATAAAT TTGTTGATCT TGTTCAATAT
TCGGTAGCCG AATTACAAGA AAAAACTTTT CAAGAAATTA CTCATTCCGA TGATTTACCC
CAAGAACTCA ATTATATTCA ACAAATGCTG AGGGGAGAGA TTGATGATTT TTCTTTAGAA
AAACGTTATA TCTGTAAAGA TGGGTCTCTA GTTTGGGGAC ATTTAAGCGG TTCTCTAGTT
CGCAATACTG AGGGAGAACC GATGTATTTT ATTGGGATTA TCGAAGATAT TAGAGAACGG
AAACAAGCCA TAGAAGATTT ACGGCAAAGT GAAGAACAAT ATCGTCGTAT TATTGAAACT
ACTGCCGAAG GAGTTTGGAT TATCGATCAG GAGAATAAAA CGACTTTTGT TAATCATAGA
ATGGCGCAAA TGTTAGGATA TACCATCGAC GAAATGAAAG GGAAATCTAT GTTAGATTTT
GTGGATGCTC AAGAACAAGA AATGGTGGCT AATCATATTG AACGTCGTCG TCAAGGAGTA
ATGGAATATA GAGATTTTAA ATTTATTCGC AGCGACGGAA ATTATTTATG GGCAATGATC
GCCACTAATC CAATTTATGA TTCTGTGGGG CATTATGTGG GCGCGTTAGG AATGTTAACG
GATATTACCG AACGCAAACA AACCGAGGAA ACGTTACAAC AAGTCAATGA ACAATTAACC
GCTAGAGTCT CCGAACTTGA ACAACGACAT CAAGATATTT TATTACTGAA TCAGGTGAAT
GATTTTCTCC AAGCTTGTCT GAATATTAAA GAAGCTTATC AAGTGATTGG GGAGTTACTT
CAACCGTTAT TTCCCGGATG TTCTGGCGGG TTATATATGC TCAATAGTTC TAAAACGGTA
GTCGAAGAGG TTGCTACTTG GGGAGAACAT TTATCGAGCA AAAATTTATT TACTTTTGAT
GAATGTTGGG CTTTACGACG AGGTTATATT CATTGGGTTA AACCCTCTCA ACGGAGTTTA
TTTTGTACTC ATACTCACGT TACCCCTGAC TTAGTTGAAA CTCTTTGTGT GCCGATGATG
GCTCAAGGGC AAGCGGTAGG ATTATTCTAT TTAAGTGCTT CAGAACCAGA CAAATTAAGC
GAAGTTAAAC AACAGTTAGC TAGGGCGGTT TCTGAACATA TTTCTTTGGC TTTGGTTAAT
TTACAATTGC GGGAATCTCT TAAAGCTCAA AGTATTAAAG ATTCTTTAAC TGATTTGTAT
AATCGTCGTT ATATGGAAGA ATCTCTAAAA CGAGAAATTA GTTTAGCTCA ACGCAAACAA
CATTCAGTCG GATTAATTAT GATTGATGTC GATCATTTTA AGGAATTTAA TGATACTTTT
GGTCATAAAG CCGGAGATTT GGTCTTACAA GAAGTCAGTA ACTTTCTGAT GATTAATGTC
CGCAGTGGTG ATATTGCTTG CCGTTATGGA GGTGAAGAGT TTCTTTTAAT TTTACCTGAA
GCTTCTTTAA CGGATAGTCA ACAACGAGCG GAACAAATTA GACAGGGAAT TAAACAACTT
GATTTTAAAC GTTATGACCA ATCTTTTCGC TCTGTTACGG TTTCTGTAGG AGTGGCAAGT
TTTCCCGATC ATGGTACTAA TAATGATCAG TTAATTCAGG CTGCTGATAC GGCTTTATAT
CAAGCTAAAA AACAAGGCCG CGATCGCGTT GTCGTTTTCT CTCCTTTTAT GGAAATGTAA
 
Protein sequence
MNHSQRLSLS ILKMTAICLI VAAIGIYSLY QSSFKQHKQW LVETTQNQAR LIEAIAENSD 
NPQIALETVL DQSEKFPGLI HPFDLILIQR ENQQIFFLRF DEENNKIDFQ SVPWQRKLSG
ESETFIEDYL GVKVLAAYEP IEPYNWGIIA QIPLNQIRAP FLMAGLYTLL AALIVNSLSG
ILGLRLGSSR GEQIEENEAL NEANEQLRRE INQRERFETA LRREIDLLAR IMETSPVGIM
MVNSQGEIIL ASEQAEQVLG LSLTQTEQPY NILEWRISDE EGNSLPPEDS PFQGVIRTEQ
SISRVRYWIE LPNEQNILVS ISASPLLNTE NQIQGVVLTL EDITERVQVE SALIHSEAQF
RAIFEQAAVG IGIVSLSGQY IRVNQRYCEL VGYSQKELLL KTYQEITHPD DLSKNLELVS
HLLLGEIQTG SIEKRYICKN GQIQWVNLTA STVSDAQNNP EYLIGIVEDI SERKRAEEAL
RDSEERFRSI FKQAAVGIVQ VSLSGKFILV NDKFVDLVQY SVAELQEKTF QEITHSDDLP
QELNYIQQML RGEIDDFSLE KRYICKDGSL VWGHLSGSLV RNTEGEPMYF IGIIEDIRER
KQAIEDLRQS EEQYRRIIET TAEGVWIIDQ ENKTTFVNHR MAQMLGYTID EMKGKSMLDF
VDAQEQEMVA NHIERRRQGV MEYRDFKFIR SDGNYLWAMI ATNPIYDSVG HYVGALGMLT
DITERKQTEE TLQQVNEQLT ARVSELEQRH QDILLLNQVN DFLQACLNIK EAYQVIGELL
QPLFPGCSGG LYMLNSSKTV VEEVATWGEH LSSKNLFTFD ECWALRRGYI HWVKPSQRSL
FCTHTHVTPD LVETLCVPMM AQGQAVGLFY LSASEPDKLS EVKQQLARAV SEHISLALVN
LQLRESLKAQ SIKDSLTDLY NRRYMEESLK REISLAQRKQ HSVGLIMIDV DHFKEFNDTF
GHKAGDLVLQ EVSNFLMINV RSGDIACRYG GEEFLLILPE ASLTDSQQRA EQIRQGIKQL
DFKRYDQSFR SVTVSVGVAS FPDHGTNNDQ LIQAADTALY QAKKQGRDRV VVFSPFMEM