Gene PCC7424_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3456 
Symbol 
ID7107079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3854902 
End bp3855633 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content33% 
IMG OID643481697 
Productpentapeptide repeat protein 
Protein accessionYP_002378718 
Protein GI218440389 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.651627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACC ATAAGCACCT AACACTTCTT TGTGAAAATG TCGATCTTTG GAATGAATGG 
AGAGACAACC ATCCCCATAT AATTCCCGAT CTTAAAAATG CCAATCTCAG TAATTTAAAC
TTAAGAGGAG CTAATTTAAC CGATGCTAAT CTTCAAGGAG CATTGTTAAG AAAAACAGTT
TTAAGAGGAG CATCATTAAA AAGAGCTAAG TTAAATTATG CAGATCTAAC TCAAGCGGAT
CTTTCTCAAG CGGATCTTTT TCAAGCTAAC TTATCAGGAG CTTTTTTGGG TCATGCAGAT
TTAAGTAAAG CCAATTTAAG GGAAGCTAAC TTGAATCACA CTTATTTACT AGAAACTTAT
TTAACTCAAA CTATTTTACA GTCTGCTAAC CTTCTTCAAG CAGATCTAAC CAAAGCTTAT
TTAGTGGAAA CCGACTTAAC TAATGCTAAC TTAGAAAGAG CGAATTTAAC TGAAGCTACA
CTCATTAATA TTAAAGCTTT AAACGCTAAC TTTAAAGTTG CTAATTTCAC TAAAAGTTGT
ATTGCCAATT GGATAGTGAA TGAAACGACC AGTTTAGATT ATGTTATTAC TGATGATGAT
TGGCAAATTC AATTACTCCA AGAAAAGACT CAAAGTTTGT CTGAGAACAA AATCCCTTGG
AAAATTCCCC AGACTTCAGA TCTATTAGAA ATCACTTCTA AACAAGAAAG ATTGATGAGC
CTTTTTAATT AA
 
Protein sequence
MTDHKHLTLL CENVDLWNEW RDNHPHIIPD LKNANLSNLN LRGANLTDAN LQGALLRKTV 
LRGASLKRAK LNYADLTQAD LSQADLFQAN LSGAFLGHAD LSKANLREAN LNHTYLLETY
LTQTILQSAN LLQADLTKAY LVETDLTNAN LERANLTEAT LINIKALNAN FKVANFTKSC
IANWIVNETT SLDYVITDDD WQIQLLQEKT QSLSENKIPW KIPQTSDLLE ITSKQERLMS
LFN