Gene PCC7424_3442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3442 
Symbol 
ID7112134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3842623 
End bp3843816 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content43% 
IMG OID643481684 
Productprotein of unknown function UPF0118 
Protein accessionYP_002378705 
Protein GI218440376 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.804701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAATG CTGACTCATC TAAACCGAAA GGCAACTGGC TACAACGATG GTGGGGAACA 
TTAAATTCTG TTTCTCGTCT TCTCGTCATT ACTCTAGCAG CCCCTTTAAC GGTTTTAAAT
GCTTGGGCAT TCTCTAACAT ATTTGGTTAC TTTCAATCAT TATTTGTCAT TATTTTGTTG
GCCTCTGTGG TGGCTTTTTT ACTCAGCTAC CCTGTCAATT GGTTAGAAAG TAAAGGGGTA
AAGCGATCGC AAGCCGCGAT CGTCGTTTTT TTGTTCACCG TCTTGACGTT TTTAGCCGTT
GGCTTAACCT TAGTTCCTGT GGCCTATACC CAAGCTCAAC AGTTAGTCGC TCGTTTACCT
GAATGGTTAG ACTCCGGACA ACATCAACTG ATGATGCTCA ATGAACGGGT GGATGAATGG
GGTTTACCCT TGAGCTTAGA TGGTTTAATT GCCCAAATTA ATAGTCGTTT AGCAGCAGAG
TTACAAAGTT TAGCCGGCAG AACATTAAAT ATTGCTGTGA GTCTGACGGT TTTTACCGTC
GTTAAATTAC TCGATGTTTT ATTGACCATC ATTTTAACCT TCTATCTCCT CCTCCACAGT
CGGGATATTT GGCAAAGTTT AATAGAATGG TTGCCTAAAC CCATTCAGCG GCCTTTTTCC
CAAACTTTAC GCAGCAGTTT TCAAAATTAT TTTCTCGGGC AAATTATTAG TGCTACCTGT
ATGGCGGTTG GGTTGACCGG TGGCTTTTTG CTCCTGAAAG TTCCCTTTGG CTTATTATTT
GGCTTAAGTA TCGGTCTAAT GGCGCTTATC CCTTTTGGGG GTTCAGTGGG AATTGTGACA
GTGACTTTAT TAATTGCTTT ACGGGATGTA GGATTAGCGT TACAGGTCTT AGCCAGTGCC
TTAGTTGTAC AACAAATAGT CGAAAATGGC ATTGCTCCGA GAATTTTAGG CAGTGTTACC
GGCTTAAACC CGTTTTGGAT TTTACTGGCT CTTTTAAGTG GGGCTAGAAT TGGGGGATTA
TTGGGGGTAA TCGTCGCTGT TCCCTCTGCC GTGATGATTA AAGAAGCCTT AAGCTTAATT
CGCTCTGTTC CCACTGGGGA TGATCTTTTA TCTAGCCTAG TCAAACATGA ATCCTCAACC
TCCGACGATC AAGCCCATTT TACCGAAGAG AAGTCAATCC GTAAGAATCA CTAA
 
Protein sequence
MVNADSSKPK GNWLQRWWGT LNSVSRLLVI TLAAPLTVLN AWAFSNIFGY FQSLFVIILL 
ASVVAFLLSY PVNWLESKGV KRSQAAIVVF LFTVLTFLAV GLTLVPVAYT QAQQLVARLP
EWLDSGQHQL MMLNERVDEW GLPLSLDGLI AQINSRLAAE LQSLAGRTLN IAVSLTVFTV
VKLLDVLLTI ILTFYLLLHS RDIWQSLIEW LPKPIQRPFS QTLRSSFQNY FLGQIISATC
MAVGLTGGFL LLKVPFGLLF GLSIGLMALI PFGGSVGIVT VTLLIALRDV GLALQVLASA
LVVQQIVENG IAPRILGSVT GLNPFWILLA LLSGARIGGL LGVIVAVPSA VMIKEALSLI
RSVPTGDDLL SSLVKHESST SDDQAHFTEE KSIRKNH