| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3253 |
|---|
| Symbol | |
|---|
| ID | 7107730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 3643458 |
|---|
| End bp | 3646061 |
|---|
| Gene Length | 2604 bp |
|---|
| Protein Length | 867 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643481497 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_002378521 |
|---|
| Protein GI | 218440192 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG ATGAATTACT TCAGATTATT CAACAAGCCA TAGAGGAAAA AGCAGAAACT
TTAGATCTCA GCTTTAAAAA ACTAGAAACC TTACCCCCAC AGATTGAACA ATTGACCCAT
CTGCGTTATC TTGACTTACG CAATAATAAG CTGACAACTC TACCCCCACA GATAGGAAAA
CTCAAAAAAT TAACATCCCT GAACTTGACA GATAATCAAC TCAGTGCATT ACCGCCAGAA
ATTGGACAAC TGAATAATTT AAGTCGGTTA CACCTAAGCT ACAATAAACT CACGAACTTA
CCGGAAGAGA TTGGACAACT CACCCATCTG AGTGAATTAT ACTTAAGTCA TAATTTTTTA
GAAACTCTCC CCACAACTTT AAACCATCTA GTTAATATCA ATCGTCTCAG TCTCAGTTAT
AATCAATTCA CATCCTTACC TCCTCAGATC AAAGGATTAA TCAGTCTTAG TTGGTGGGAT
CTCAATAACA ATCAACTGAC AACTTTACCC CCAGAAATTG GACAACTCAA AAGCTTAAAT
CAATTAGACC TAGGATATAA TCAACTGACA ACTTTACCTC CTGAAATTGG AGAACTTTAC
CGTCTCACTT CCCTTGATGT CAGTTATAAT CAATTGATAA GTCTTCCTCC AGAAATTCAA
TTCCTGATTA ACCTTGATTC TCTCACTCTC AGTAATAATC AACTGGCAAC TTTACCTCCT
GAAATTGGAT TTTTAAGTAA TCTTATCTCT CTTAATCTCA GTTACAATCA ACTGACAAGT
ATTCCTCCCG AAATTGGACA ATTAACTAAG CTGATTCAGT TCAGATTGAG CCATAATAAA
ATAGAAACTT TACCTCCTGA GATTAGATGC TTGACTCAAC TCACCTCATT AATGTTAAAA
AATAATCAAC TTCTAGCCTT ACCCTTAGAA TTAATTCAAC TGGTTCAATT TTTTAAACTA
ACTCAGCTTG ATGTCCAAGA AAATTTACTG ACTATTCCTC CCGAAATTAT TTGGAGAAAA
GATGAACCGG ATTTAATCGT TAACTTTTAT TTACATCAAT TAGTTGAAAA AAAACATCCG
TTAAATGAAG CTAAAGTCTT ATTAGTCGGA GAGGGAAGTG TCGGTAAGAC TTCATTAATG
AGAAGATTAC TGTATGATAC ATTTACAGCT AATCAACCTA AAACCGATGG CATTAATATT
GTTCCTTGGA ATATTGATAT CGGGGGAAAT AATGTTAAAT TAAATATCTG GGATTTTGGC
GGTCAAGAAA TTTATCACGC TACGCATCAA TTTTTCTTGA CTAAAAGAAG TCTTTATATT
TTGGTGTTAA ATAATCGACA AAATGAAGAA CAAAATAGAG TTGAATATTG GCTAAAACTG
ATTCAAACTT TTGGGGGAGA TTCTCCGATT ATTATTGTTG GTAATCGACG AGATGAACAT
TTATTAGATC TGAATCAACC TTGCTTACGA GACAAATATA AAAATATTAC AGCCTTTATT
CAAACCTCTT GTAAAACTGG GGATGGTTTC CCCGAATTAA AAGAGAAAAT TATTCAAGAA
ATTAGTCAAT TAAAAGAGGT TTTTGAAGAG GTACGAGTCG AGTGGGTGTC TGTTAAAAAA
CAATTGGAAA ATCTCAAAGG ACGCAACTGG GATTATATTC CTTATAGTCA TTATCAAAAA
ATGTGTGAAG CGCAAAAAAT CATTGACGAT CAAAGTCAAC GAATTTTAAT TCGGTTTCTT
CATGATTTAG GGGTCGTTTT AAATTTTCAA GAAGATACCC GCTTAGAAGA TACAACGATT
TTAAATCCTA CTTGGGTTAC CAAAGGAGTC TATAAAATTC TCAATGATAA TACCTTAATG
ACTCATTATA AAGGAATTCT ATTAACCGGA ATGTTAGAAC GTATCCTTGA TAATCCTCTT
CGATATCCTA AAGAAAAACA TCAATTTATC ATTGATATGA TGTGTAAATT TGAACTTTGT
TTTAAATTAG AAGGAAGTGG AGAAGATGAA TATTTAATTC CTGATTTATT ACCGAAAGCA
GAACAATATA CAGGGGAATG GGAAAACGCT TTAGTCTTTC AATATCATTA TCAAATTCTT
CCCAGTAATA TTATTTCTCG TTTTATGGTC AAATTAAATC ATTTAATTTA TCAACAAACT
TATTGGCGCA GTGGGGTAGT TTTGGCTTAT CATCAAAATA AAGCTTTAAT TAAAGCTGAC
CGAGAAGATA AAAAGATTTT GATTGCCATT CAAGGACTTG AAGAAACTAG ACCGGAATTT
CGTCAGATCA TTCGTTCTAT TTTTGAGTTA ATTCATCAAA GTATTTCGGG AATTCAAGTC
AGTGAATATC TTGTTTTACC TCATTCTAAT CCAGCCATAC TGATTGACTA TCAATATTTA
TTAAATTTAA AAAAATTAGG GGAAGAAAGT TTTATTCCTC ACGGATCAAA TGAAAGAGTG
AGGGTCAATG AGTTATTGAC GCAATTTGAT CAGTATCCCC GAATCCATCA GTCTCCATCA
TCCCCAACTT TAAAGAAAGA GAAAAATCTA ATTGCTAAAA CTGTTAAATT ATTATTCTCC
CATAATTCTT CCGATGAAAA ATAG
|
|---|
| Protein sequence | MTDDELLQII QQAIEEKAET LDLSFKKLET LPPQIEQLTH LRYLDLRNNK LTTLPPQIGK
LKKLTSLNLT DNQLSALPPE IGQLNNLSRL HLSYNKLTNL PEEIGQLTHL SELYLSHNFL
ETLPTTLNHL VNINRLSLSY NQFTSLPPQI KGLISLSWWD LNNNQLTTLP PEIGQLKSLN
QLDLGYNQLT TLPPEIGELY RLTSLDVSYN QLISLPPEIQ FLINLDSLTL SNNQLATLPP
EIGFLSNLIS LNLSYNQLTS IPPEIGQLTK LIQFRLSHNK IETLPPEIRC LTQLTSLMLK
NNQLLALPLE LIQLVQFFKL TQLDVQENLL TIPPEIIWRK DEPDLIVNFY LHQLVEKKHP
LNEAKVLLVG EGSVGKTSLM RRLLYDTFTA NQPKTDGINI VPWNIDIGGN NVKLNIWDFG
GQEIYHATHQ FFLTKRSLYI LVLNNRQNEE QNRVEYWLKL IQTFGGDSPI IIVGNRRDEH
LLDLNQPCLR DKYKNITAFI QTSCKTGDGF PELKEKIIQE ISQLKEVFEE VRVEWVSVKK
QLENLKGRNW DYIPYSHYQK MCEAQKIIDD QSQRILIRFL HDLGVVLNFQ EDTRLEDTTI
LNPTWVTKGV YKILNDNTLM THYKGILLTG MLERILDNPL RYPKEKHQFI IDMMCKFELC
FKLEGSGEDE YLIPDLLPKA EQYTGEWENA LVFQYHYQIL PSNIISRFMV KLNHLIYQQT
YWRSGVVLAY HQNKALIKAD REDKKILIAI QGLEETRPEF RQIIRSIFEL IHQSISGIQV
SEYLVLPHSN PAILIDYQYL LNLKKLGEES FIPHGSNERV RVNELLTQFD QYPRIHQSPS
SPTLKKEKNL IAKTVKLLFS HNSSDEK
|
|---|
| |