Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3198 |
Symbol | |
ID | 7108112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 3584874 |
End bp | 3585758 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643481443 |
Product | pentapeptide repeat protein |
Protein accession | YP_002378467 |
Protein GI | 218440138 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.00492163 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATTG GTCATTTACT TAGATTATAT GAACAAGGGA ATAGGGATTT CACGGAGATT GATCTCAATG GGGCAGATTT ACATCACGTC ACCTTGCTTT CAGTCAATTT GATGGGAGCT AACCTCATGG GAAGTAATCT CAGTCGTGGA TTTTTTATTA AATCTAATTT AAGTAGAGCA AAACTAAATT GGGCTAATCT CACCTTTGTG AAAATGAGTC AAGCTGAGTT AGTAGAAGCA GATTTAACTA AAGCTAACCT CAGTGGTGCA TTTATGGTTA AATCTAATCT CATGAAAGCG AAAATGAGTG GGGCTGATTT ATCCCATACC AATTTACGAG GTTCGGATCT TCGAGGCGCG AATTTGTGTG GTGCTAATCT TTATCGCGTC AATTTACGGG AAGCGAATTT ACAGGGAGTT AATTTTAATT GGGCGAATTT AAAAGAGGCT CGTTTAAGTT CAGCAATTTT AACCGATATT TGTTGCTATC ATGCTAATTT TAGCGGAAGT TTTTTAAAGG ATGTAGATCT ATCTGGGGCA GATTTAGAAG GAGTTGACCT CAGTTATGTA AAATTAGGGG ATAGTCAATT AGTTGGGGCG AATCTTTCTG GAGCAAATCT CACGGGAGCT AATCTCCGAA ATGTGGATTT AAGAGGGGCA AATTTAAAAA AAGCCAATTT GTCTGAGGCT AATTTAGACG GAGCGAATTT AGAGGGAGCT ATTTTAACAG GCGCTATTTT ACGAGAGACT AATTTATCTG AGGCAAAAGG AGTCAAAGTT AAGCCAGATA AAATTTTTAA TACTCAACCG ATAAAAAATG AGAGTTCTAA GTTATCTTTT GATTCCTCTA CTTTAAAAAT TTTGCAAGCA AGGTTTGTAA GTTAA
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Protein sequence | MKIGHLLRLY EQGNRDFTEI DLNGADLHHV TLLSVNLMGA NLMGSNLSRG FFIKSNLSRA KLNWANLTFV KMSQAELVEA DLTKANLSGA FMVKSNLMKA KMSGADLSHT NLRGSDLRGA NLCGANLYRV NLREANLQGV NFNWANLKEA RLSSAILTDI CCYHANFSGS FLKDVDLSGA DLEGVDLSYV KLGDSQLVGA NLSGANLTGA NLRNVDLRGA NLKKANLSEA NLDGANLEGA ILTGAILRET NLSEAKGVKV KPDKIFNTQP IKNESSKLSF DSSTLKILQA RFVS
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