Gene PCC7424_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3195 
Symbol 
ID7108109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3581597 
End bp3581995 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content43% 
IMG OID643481440 
Productanti-sigma-factor antagonist 
Protein accessionYP_002378464 
Protein GI218440135 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.00808217 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGAATTA AGGAGGAAGC CATTCCAGAT CCACTTAACC TGACAGTTAG TTTACGCGGA 
ACTCGGGAAG TCAGGAAAAA CTACCAAATC TTTCGTCTGA CCGGACTACT CGATGCTTTT
TCTGAACCCA CGTTTCGGAA GGTCATCAGC ACTCACATTG ATGAAGGGCC TACAGATGTG
GTGTTAGTTC TATCTCAAAT AGATTTTATC GATAGTTCCG GCTTGGGCGC ATTAGTTCAG
TTAGTTAAAC AAGCGCAAAC GGCGGGAGGC AGTTTACAAA TTGTTACCAA TCCACGAGTA
ACACAAACCG TTAAACTCGT TCGTCTAGAA AAGTTTCTTT CCCTTCAGCC TTCAGTTGAA
GATGCACTAG CTAACATAGA AAACAAAGAT AAGAGCTAA
 
Protein sequence
MRIKEEAIPD PLNLTVSLRG TREVRKNYQI FRLTGLLDAF SEPTFRKVIS THIDEGPTDV 
VLVLSQIDFI DSSGLGALVQ LVKQAQTAGG SLQIVTNPRV TQTVKLVRLE KFLSLQPSVE
DALANIENKD KS