Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3149 |
Symbol | |
ID | 7108063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 3528341 |
End bp | 3529228 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643481395 |
Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
Protein accession | YP_002378419 |
Protein GI | 218440090 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.363768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACAG CAAAACTTGA CCCAGTTCGC TCCTATCTTC AAGAAATTGG ACGAATTCCC CTATTAAATT CTGAGGAAGA AGTTCAACTA GCGACTAAAG TGCAAAATAT GTTGCCTTTA TTAGAAAAAG AAAATCTGAC GGCAGCAGAA AAGAAAATTG TAGAGCAAGG GCAAATCGCC AAGCGAAAAA TGATTCAAGC TAACTTACGC TTAGTGGTTT CTATCGCTAA AAGATACCAG AGACGGGGTT TATCGTTATT AGATTTAATT CAAGAAGGAA GTTTAGGATT AATTCGGGCT GTTGAAAAAT TTGATCCGTC TAAAGGATAT AAATTTTCGA CTTATGCTTA TTGGTGGGTT CGACAAGCGA TTACTAGGGC ACTTGCAGAA AAAAGTCGTA CCATTCGTCT GCCGATTCAC ATGACAGAAA ATTTAAATCA ACTCAAAAAA AGTGTGCGAG AATTGACTGG GGAATTAGGC AGAAAACCGA ATGAACAAGA AGTTGCTCAA CGGATGGAAA TTCCAGTTGA AAAATTAAGA GAAATTCGTC ACGCTGTTTA TCGAACCGAT GCTAAAAGTT TGAATATTAC TTTAGATGAT AATCAAACCG AATTAGGGGA AGTTTTACCC GATGAAACCT CTTTGCCAAT TGAATTTGTT TCTCAATGGG AATTAGTGAC TAAAATTAAC GATTTACTCG AAGATTTACC CCCACGCCAA CGAGAAATTA TTACTCTACG TTTTGGCTTA CAAACTGGTA AACGAATGAG TTATAAAGAA ATTGGGCGAC AATGCGGAAT TAGCCATGAA CGGGCACGAC AGCTATTAAA TCGAGCTATG AGAACTCTAA AACAGAAAGC TTTTCGCCTT GGAGAAGTTG CTGTCTAA
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Protein sequence | MATAKLDPVR SYLQEIGRIP LLNSEEEVQL ATKVQNMLPL LEKENLTAAE KKIVEQGQIA KRKMIQANLR LVVSIAKRYQ RRGLSLLDLI QEGSLGLIRA VEKFDPSKGY KFSTYAYWWV RQAITRALAE KSRTIRLPIH MTENLNQLKK SVRELTGELG RKPNEQEVAQ RMEIPVEKLR EIRHAVYRTD AKSLNITLDD NQTELGEVLP DETSLPIEFV SQWELVTKIN DLLEDLPPRQ REIITLRFGL QTGKRMSYKE IGRQCGISHE RARQLLNRAM RTLKQKAFRL GEVAV
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