| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3126 |
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| Symbol | |
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| ID | 7107912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 3501716 |
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| End bp | 3504235 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643481372 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002378396 |
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| Protein GI | 218440067 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAG CATCAGATGT TCGTCATATT TTAGTTATTG AAGACCAAAA ATCAAAACGA
ATTGTTTCTC TAAAGGAAAA CACTTACACA GTCGGTCGTG ATCCTAATGC TTCAATAATT
TTATATGATC GTCAAGTTTC CCGTCATCAT GCCACTTTAT TGCGAATTAA AGATTATCAA
AACCGTCACA GTGTTTATCG GATTATTGAT GGAAATTTAC AGGGAAAAAA AAGCACTAAT
GGCATAATTG TCAATGGTAA ATATACCTTA GATCATGAAC TAAAATCTGG GGATTTAATT
CGTTTTGGGA CGACTTCTAA AGCTAGTTAT CATATTCTTC CATCTACCTC AACCCCCTTA
GAAATGGATT TATTAAAAGC CAGGGATATA GAGGATAAAA TAACCGAATC TCAATCCGAT
ATTGAGACAA TAGAATTTGA GGAATTATTT GAAGAAGAGC CAGAAGAAAC AAATACAATT
ATTTTTAATA GAGAAAAAGA AAAATCCTCG GCTGAATTAA GGTCAGAAAG TTCATCTTTA
ACCGAAAATA ATCCTAATTT AATTGTTGAC ATTAACTATG ATGGAGCTTT AGTTTATCTC
AATCGGACAG CTAGATTTAA ATTTCCAGAC TTATTAGAAA AACAAGTAGA ACATCCCCTA
CTCAAGGGAT TAAATCATCA AATTAAGGCT CAAGAAGAAA CTTCATTAGT TCGGGAAATA
CAAATTAATG AGGAATGGTT TAAACAGCAT ATTAATTACT TGCCTGAGCC TCAAATCATT
AGAATTTATA GTTTTGATAT TACTCCCTAT AAAACGATTG AAAGTCAACT CAAATTCCGA
GAAGAACGCT ATGAATTTTT AGTAGAAAAA GCCTCAGAAG GAATTTTATT AATTGATGCT
CAAACTAAAC AAATTATCGA CGCGAATTTA GGAATATGTG AGTTATTGGG GTATGATCAT
GAGGAAATTA TTAACCTTAA TCTCTATAAT CTAATTGCCC TCGATCGAGA AATTATAGAG
GCCGAATTTG AACAAGTTAT CGAAAGCTCA TCTGATTTAA TTGATGAGTC TTTATATCGT
TGTCAAGATG GGTCTTTAAT TAGTGTAGAG GCTAAAATTA ATTCTGGGCA ATATCGGGGA
AAAGATATTT TTTATATTTC CATTCAGGAT ATTACAGATC GTAAACGCTC AGAAGAACAA
ATGCAGTATC AAGCGTTTCA TGATCCTTTG ACGAATCTTC CTAACCGAAA ACTTTTTACT
CAACAGGTAT CTCTAGCTTT AAATAATGCG AAAAAGAACC AAACCCTCTT GGCAGTAATA
TTTTTAGATT TAGATTCTTT TAATCATATC AACAATACTT TAGGGCATAG TATTGGAGAT
CAACTTTTAC AAAGCTTTGC TCAACGATTA ATTTCTTGTA TTCCGGCTGG AGATACGATA
GCTCGTTGGG GGAGTGATGA TTTCACTATT TTATTACCCC GGATCAAGAA TATAGAAGAA
ACCGTCAAAC TATCAGAAAA AATCTTTGAA GATTTAAAAC AACCTTTTCG GATTGAAAAT
CAACAGTTAC AGGTAAAAAT TAGTCTGGGA ATTGCCATTT ATCCCCAAGA TGGAGAGGAT
GAAGAAAGCT TATTAAAAAA TGCGGCTGTA GCTCTCACAA AAGCGAAAGA ACAGGGACGG
AATAATTATC AATTTTATAC GCCGCTTATG AGTGCCCAAT CTGCTCTGTT ATTAAAACTA
GAAAACGCAC TTCATAGAGC TTTAGAACGT CGAGAATTGT CGTTATACTA TCAACCTCAA
ATCAAAATTA GTACCGGTGA AGTAACAGCA ATGGAAGCAC TGTTACGATG GGAAGTCCCT
GAAGTTGGGT TTATTTCCCC GATAAAACTA TTCTCCCAAG GGCAAAAAAC CGATGTCATT
CTACAAATTA GTCAATGGAT ACTACAAACA GCCTGTGAGC AAAATTTAGC CTGGCAAGAA
CTCGGACTTC CTTCCATTCC CATAAGTATT AATTTATCTA ATCGAGAATT TGAACAACAA
AATCTAGTAG AAAATGTGGC ACGAGTATTA CAAAAAACTG GGCTAGATCC TCAATGGTTA
GAATTAGAGA TAACTGAAAC CATACTCAGA AAAAACTTAA AATCTGCTCG TCAAGTTTTT
CAAGATTTTT ATAATCTTGG GGTTCGTCTA GCTTTAGATG ATTTCGGCAG TGGGTTTTCT
TCCATTGGCT ATTTTAAACT ATTTCCCTTT CGTACCGTTA AAATCCATCA ATCTTTCATT
CGAGATTTAA GGGGAGCGTC CCAAGAAATG GCGTTAATTT CTGCGTTATT AACCTTGGGG
AAAGGATTTA ATTTAAGGGT TGTTGCCGAA GGGGTAGAAA CCTCCTCTCA ACTAGAACTT
TTGAAGAGTT TACAGTGTGA AGAAGTCCAA GGCTATGTTT ATACTCGTCC CCTCAAAAGT
GCGGAAGCCA CTCAATTTTT AACTAAACAG TTGTCCCTCA CCTTCGGACA AAATCAATAA
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| Protein sequence | MSKASDVRHI LVIEDQKSKR IVSLKENTYT VGRDPNASII LYDRQVSRHH ATLLRIKDYQ
NRHSVYRIID GNLQGKKSTN GIIVNGKYTL DHELKSGDLI RFGTTSKASY HILPSTSTPL
EMDLLKARDI EDKITESQSD IETIEFEELF EEEPEETNTI IFNREKEKSS AELRSESSSL
TENNPNLIVD INYDGALVYL NRTARFKFPD LLEKQVEHPL LKGLNHQIKA QEETSLVREI
QINEEWFKQH INYLPEPQII RIYSFDITPY KTIESQLKFR EERYEFLVEK ASEGILLIDA
QTKQIIDANL GICELLGYDH EEIINLNLYN LIALDREIIE AEFEQVIESS SDLIDESLYR
CQDGSLISVE AKINSGQYRG KDIFYISIQD ITDRKRSEEQ MQYQAFHDPL TNLPNRKLFT
QQVSLALNNA KKNQTLLAVI FLDLDSFNHI NNTLGHSIGD QLLQSFAQRL ISCIPAGDTI
ARWGSDDFTI LLPRIKNIEE TVKLSEKIFE DLKQPFRIEN QQLQVKISLG IAIYPQDGED
EESLLKNAAV ALTKAKEQGR NNYQFYTPLM SAQSALLLKL ENALHRALER RELSLYYQPQ
IKISTGEVTA MEALLRWEVP EVGFISPIKL FSQGQKTDVI LQISQWILQT ACEQNLAWQE
LGLPSIPISI NLSNREFEQQ NLVENVARVL QKTGLDPQWL ELEITETILR KNLKSARQVF
QDFYNLGVRL ALDDFGSGFS SIGYFKLFPF RTVKIHQSFI RDLRGASQEM ALISALLTLG
KGFNLRVVAE GVETSSQLEL LKSLQCEEVQ GYVYTRPLKS AEATQFLTKQ LSLTFGQNQ
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