| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3125 |
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| Symbol | |
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| ID | 7107911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 3499370 |
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| End bp | 3501508 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643481371 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002378395 |
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| Protein GI | 218440066 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACC CTAAACCGCC TTTTCGCCAT ATCTTTCTTA TCGAGGATCA AAAAGCTCGA
CGGCTTATTA CCCTTGAAAA ACAAACCTAC ACCATCGGTC GGGAATCGAG TAACGACATT
GTCATCTATG AGCGGGTGGT CTCTCGCCAT CATGCGACTT TGCTAAAAGT CAACAAAAAT
TCTACAGGAC AAAAATACTC CTATCGCATT GTAGATGGAG ACCTACAAGG CAATCCCAGT
ACCAATGGTT TAATCGTGAA CGGGCGAAAT TGCGAAACCC ATGACCTAAA ACATGGAGAT
GTTATTTTAT TTGGAGGACA AGCCAAGGCT TCTTATTTTA TCGTTTCTAG TGCTATAGAT
ATTGCTTTAT TTAACGAAGT CGAGTCAGAT CAACTCGCGG AACTATTGGA TAATTATGAG
AATAAAGTTC CAGGAGAAGA GGAGAATAAA TCAACGGCTA TTTGGCCAGC AAATGAGGAG
AACATTTATC AAGAAGAAGA TTTAAATCGG TTAGCCTCTT TTCCGGAATT AAGCCCTAAT
CCTATCATTG AAATTAGTTT TCAAGGAGAA ATAACTTATA TTAATCCTGC CGCTAATCTT
CAATTTAATA ATCTTCAACA GCTACAATTA GACCATCCAA TTTTGATGGG ATTACTAGAT
CAAAGCAAAA ATACTCAGGG AAATTTATTG TTACGAGAAG TTCAAGTTGA AGAGTCTATA
TATGAACAAT ATGTTCATTA CCTCCCTAAT CATCAATTGA TTAGAAGCTA TCTGTTTGAT
ATCACTGAAC GAAAACGCAC AGAGCAAAAA TTAAAATATC AAGCTTTTCA CGATGTTTTA
ACAGGATTAC CTAATCGAAT TTGGTTTAAT CAACAATTAA TCGCAGCCCT CAATAATGCC
AAACGACAAG AAACTCCCCT AGCGATTTTG TTCTTAGATT TAGATGGGTT TAAAAATATC
AACGATACTT TAGGTCATAC TTTTGGGGAT CAAGTCTTAC AAAAGTTTGG TAAACGTTTA
TTAGGTTCTG TACGAGCCGG TGATACGGTA TGCCGTTGGG GTGGAGATGA ATTCGTCGTT
TTATTGCCTT ATATTTCTCA CACAGAAGAT AGTATTAAAT TAGCTCAACG AATTCTTGAC
GTTCTCAAAC ACCCTTTTGA AATTCAAAAA CAACAATTTT ATATTAAAAC TAGCATGGGA
ATTTCTATCT ATCCTCAAGA TGGAGAAGAT GGAGAAACTT TATTAAAAAA TGCAGATGCT
GCCCTTTATC GAGCTAAAGA ACGAGGACGA AATCATTTTC AATTTTATAG TACAACAATG
ACAACTAAAG CCTCTCTAGT GTTGAGGCTA GAAAATCTTT TACATCGAGC TTTAGAAAAT
CAAGAATTAT CTTTATATTA TCAGCCACAA GTTAAGATCA AAACGGGTGA AATCACTGGA
ATAGAGGCAC TATTACGATG GACTCATCCT GAATTAGGAC AAGTCTCACC CCATAAATTA
ATTCCTTTAG CCGAACAAAC GGATTTAATT ATTCCTATTG GTCAATGGGC TTTAAAAACA
GCTTGTCAAC AAAGTTTAGA TTGGCAAAAA TTAGGGATTA AACCTCTGCC GATCGCTGTT
AATTTTTCGG CGCGTCAGTT TCAACAACCA AATTTAGTTA CCCTGATCAA TCAGGTATTA
GAAGAAACCG GGTTAGCTCC AAATTTACTA GAGTTAGAAA TTACAGAAAC AACGATTATG
CAAAATGAAG ATTTTGCTCG GCAAGCGTTA GAAGAGTTAC GCCAGATGGG AGTGCATATT
TCTTTAGATG ATTTTGGAAC GGGATATTCT TCTCTTTCCT ATCTGCAAAA ATTTCCTTTG
ACTACCCTAA AAATCGATCA ATGTTTTACG CATTCTTTGA AAGATAACCC CCAAGATTTG
GCTATTATTT CAGCGATAAT TACTTTAGGA AATCATTTAC AATTAAGAGT GATAGCTGAG
GGGGTAGAAA CTCTGCAACA ACTAGAGATT TTACAACGTC TTCACTGTCA AGAAGCCCAA
GGTTTTTGGT TTAGTCGCCC TCTGAACTCT GAAGATATTA CTCAACTTTT AAAACAATAT
TTTTTGTCAG GACTCGAAGA GGATGATCTC AAAAATTAA
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| Protein sequence | MNHPKPPFRH IFLIEDQKAR RLITLEKQTY TIGRESSNDI VIYERVVSRH HATLLKVNKN
STGQKYSYRI VDGDLQGNPS TNGLIVNGRN CETHDLKHGD VILFGGQAKA SYFIVSSAID
IALFNEVESD QLAELLDNYE NKVPGEEENK STAIWPANEE NIYQEEDLNR LASFPELSPN
PIIEISFQGE ITYINPAANL QFNNLQQLQL DHPILMGLLD QSKNTQGNLL LREVQVEESI
YEQYVHYLPN HQLIRSYLFD ITERKRTEQK LKYQAFHDVL TGLPNRIWFN QQLIAALNNA
KRQETPLAIL FLDLDGFKNI NDTLGHTFGD QVLQKFGKRL LGSVRAGDTV CRWGGDEFVV
LLPYISHTED SIKLAQRILD VLKHPFEIQK QQFYIKTSMG ISIYPQDGED GETLLKNADA
ALYRAKERGR NHFQFYSTTM TTKASLVLRL ENLLHRALEN QELSLYYQPQ VKIKTGEITG
IEALLRWTHP ELGQVSPHKL IPLAEQTDLI IPIGQWALKT ACQQSLDWQK LGIKPLPIAV
NFSARQFQQP NLVTLINQVL EETGLAPNLL ELEITETTIM QNEDFARQAL EELRQMGVHI
SLDDFGTGYS SLSYLQKFPL TTLKIDQCFT HSLKDNPQDL AIISAIITLG NHLQLRVIAE
GVETLQQLEI LQRLHCQEAQ GFWFSRPLNS EDITQLLKQY FLSGLEEDDL KN
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