| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3118 |
|---|
| Symbol | |
|---|
| ID | 7107904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 3482747 |
|---|
| End bp | 3484507 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643481364 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_002378388 |
|---|
| Protein GI | 218440059 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCTG TACTTAGGAT ACAAAACTTT ACCCTGATTG ACCAACTAGA ACTAGAGTTT
GGCACAAAAT TAAACGTTTT GACGGGGGAA ACTGGCGCAG GTAAATCAAT TATTCTTGAT
GCGATCGATG TCGTCTTAGG GGGTAAAGCT AATTATCGTC TCATCCGCCA AGGCACTCAA
CAGGCTATGA TAGAAGCTAC CTTTCACCTT AATCCTAACC TGAGTCTGTG GCTATCTCAA
CAACAAATAG ACCCCCTAGA CGATGGAACT CTCGTCTGTA CGAGAGAACT CACCCTAAGC
AGTAATTCTA TCCGATCGCG TTCTCGGATT AATGGGGTTT TAGTTAATTT ATCATTAATC
AATCAACTTC GAGAGCATTT GGTGGAAATT ACGGCCCAAG GCCAAACCGT ACAGTTAATG
GACTCCGCTA TCCAACGGGA ATTACTCGAT CTCTATGGGG GTCAACCGAT TTTAACGCAA
CGGCAAAAAG TCGTCTCAGT TTACGAAATT GCCAAAACCG CTCATCAAAC TTTAGAAAAA
CGCAGACAAT CAGAACAACA ACGCCTGCAA CGGCTCGATT TACTTCAATA TCAACTTAAA
GAACTCGAAG AAGTTAAATT AACTGACCCT GACGAACTCG AACAATTAGA ACAAGAACGC
GATCGCCTTT CCCATGTGGT GGACTTGCAA CAATTGAGTT ATCGAGTCTA TCAACTTCTG
TATCAAAATG ATAGCGGCGA CTTAGCGATC GCCGATCTCT TGGCCGATGC TGAGTCACTC
TTGACAAATA TGGCAGAGTA TGATAATGAA ATTAATTCGG TTTTAGAGAT GGTCAAAACG
GCACTGACCC AAATTATAGA AGCCGGACAA CAAATTAACG CTTATGGAGA CGGTTTAGAA
GCCGATCCAG AAAGATTAAC AGAAGTAGAA GAACGCATTC TTATTTTAAA GCGAATTTGC
CGTAAATATG GCCCCACGTT ACCCGAAGTA ATCGCACATT ATGAGAAATT ACAACAAGAA
TTAAGTGAAT TAACTGATAG TGAACAGTCG ATCGAACAAT TAGAAAAAGA TTATCAAATT
GCCCAAGAAA AATTAATTAA AACCTGTGAA GATTTAAGCG AACTTCGTCA ACAAGCAGCC
GAAAAATTAG AAAAACAATT GATTAAAGAA TTAAAACCTT TAGCAATGGA CAAAGTTATT
TTTGCTTGTA AAATCTTCCC TTGTACTCCT GGGGTAACGG GTGCAGATCA AATTATCTTT
TATTTTAGTC CTAACCCAGG CGAAAAAATA CAACCTCTTT CTCATACCGC TTCTGGGGGG
GAAATGAGTC GTTTTCTCCT CGCCTTAAAA GCTTGTTTTT CCCAAACCGA TAACCCCTCT
CATACCCTGA TTTTTGATGA AATAGACGCA GGAGTATCGG GAAAAGTTGC TCAAGCGATC
GCAGAAAAAT TGCATCAATT GAGTGAAAAA CATCAAATTT TATGTGTCAC TCATCAACCT
TTAGTCGCAG CAATGGCCGA TGCTCATTTT CGGGTCGAAA AAGAAATGAT TGAAGACTAT
TCAAAACAAG AAGATTCCCA AAATGGTCAA TTAAATTTTC CGGAAATTCG CACTGTAGTT
AGAGTCAGAA AATTAAATAA TCATCAAACT CGGCGAGATG AATTAGCTTT ACTTACGGGG
GGACATTCCG CAGATGAAGC GATCGCTTTT GCTGACTCTT TATTATTAAA AGCGACGGCC
TATCGGTTGG GAAAGTCGTA G
|
|---|
| Protein sequence | MLSVLRIQNF TLIDQLELEF GTKLNVLTGE TGAGKSIILD AIDVVLGGKA NYRLIRQGTQ
QAMIEATFHL NPNLSLWLSQ QQIDPLDDGT LVCTRELTLS SNSIRSRSRI NGVLVNLSLI
NQLREHLVEI TAQGQTVQLM DSAIQRELLD LYGGQPILTQ RQKVVSVYEI AKTAHQTLEK
RRQSEQQRLQ RLDLLQYQLK ELEEVKLTDP DELEQLEQER DRLSHVVDLQ QLSYRVYQLL
YQNDSGDLAI ADLLADAESL LTNMAEYDNE INSVLEMVKT ALTQIIEAGQ QINAYGDGLE
ADPERLTEVE ERILILKRIC RKYGPTLPEV IAHYEKLQQE LSELTDSEQS IEQLEKDYQI
AQEKLIKTCE DLSELRQQAA EKLEKQLIKE LKPLAMDKVI FACKIFPCTP GVTGADQIIF
YFSPNPGEKI QPLSHTASGG EMSRFLLALK ACFSQTDNPS HTLIFDEIDA GVSGKVAQAI
AEKLHQLSEK HQILCVTHQP LVAAMADAHF RVEKEMIEDY SKQEDSQNGQ LNFPEIRTVV
RVRKLNNHQT RRDELALLTG GHSADEAIAF ADSLLLKATA YRLGKS
|
|---|
| |