| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3093 |
|---|
| Symbol | |
|---|
| ID | 7107876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 3456739 |
|---|
| End bp | 3457902 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643481336 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_002378363 |
|---|
| Protein GI | 218440034 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTAG ATTCCCGTAC TGCTATTGCT TTAATTTCAA TTGTATTTGC CTTGCAATCT
GTTCCTTTAA TATTAGTGTA TTTATTAGCC AATCAATACA AAGGCATTAA TTATTGGTTA
ATTGGTAATG TGTTAATCGC TGTTGGATAT TTTCTAGTTT CTTTGCGAGG AGTGATTATT
GATTTTTTTT CAATTACTAT CGCTAATATT ATTTCAATAC TAGGACTTTC TCTTTTGGGT
TTGGGAGTTT CACGATTTAC TCAACAAGTT TATCCCCGTT ATTTTATTCT GGCTTTAAAT
GCTATTTGGT TAGTGATTCA TCTTCATTTT ACTTATATTA ATGACAATAT TATTATCCGA
ATTATCAATT ATTCAGGGAT AGGTTCTATA ATTTTTATAT TTGCCGCTTA TCAGTTGCTC
TCTTATAAAG ATAAACGATT GATTATTTCT ATTCGTTTTA CGGCTATTGT CTTTTTATGT
TCTGCTAGTC TATTTTTAAT CCGTATAATA GTAGTTTTAT TAAATAATTA TTCTAATCCT
TTATTTGATA ACAGTTTATC TCAGACTCTC CTTCAGATAT CTTATCTGAT CATGAGTTTT
CTTTTAACAG TAGGATTGGT CAGTATGATT AGTCAACGAC TTTATGAAGA TCTTCGGACT
CTTGCTATCT ATGATTTTTT GACTGAGACT CTTAACCGTC GTGCTATGCA GTTAGAAATA
AATAAAGAAA TTGCTTATTT TAATAGACGA AAAGAACAAT TTGCTTTAAT TTTAATGGAT
ATCGATCGCT TTAAATCGAT TAATGATAAT TATGGTCATG ATTGTGGTGA TCTTGTGCTT
CAACATTTTA CTCGAACTAT TAAAAATAAT ATTCGAAAAG AAGATGCTTT AGGCAGGTGG
GGAGGGGAAG AATTTCTTAT CCTTTCAAGG GGAAGTAATG TTGAAGATGC TTTAATTTTA
GCAGAACGTT TAAGAAGTGC AATAGAAAGT GAAAAGGTTA TTACAGGTCA TACTATTATT
AAATATACCC TAAGTTTAGG GGTTGCTGTT TATGGAATTC ATGGAACGAC TCAAGAACAA
TTAGTTAAAG CAGCAGATAA AGCTTTATAT GAAGCTAAAA ATTCCGGTAG AAATCAAGTT
GCGATCGCTA CTGTATTCCT ATAA
|
|---|
| Protein sequence | MALDSRTAIA LISIVFALQS VPLILVYLLA NQYKGINYWL IGNVLIAVGY FLVSLRGVII
DFFSITIANI ISILGLSLLG LGVSRFTQQV YPRYFILALN AIWLVIHLHF TYINDNIIIR
IINYSGIGSI IFIFAAYQLL SYKDKRLIIS IRFTAIVFLC SASLFLIRII VVLLNNYSNP
LFDNSLSQTL LQISYLIMSF LLTVGLVSMI SQRLYEDLRT LAIYDFLTET LNRRAMQLEI
NKEIAYFNRR KEQFALILMD IDRFKSINDN YGHDCGDLVL QHFTRTIKNN IRKEDALGRW
GGEEFLILSR GSNVEDALIL AERLRSAIES EKVITGHTII KYTLSLGVAV YGIHGTTQEQ
LVKAADKALY EAKNSGRNQV AIATVFL
|
|---|
| |