Gene PCC7424_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3080 
Symbol 
ID7107863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3443639 
End bp3444355 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content42% 
IMG OID643481323 
Productprotein of unknown function DUF541 
Protein accessionYP_002378350 
Protein GI218440021 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.438454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACCTG TAATTTCTTC AAGAAAATTA ATTATTGCCC TTAGCTACTT AAGTCTTACC 
TTTATGCAGC CCGCTTTTGC TCAGGAACAA ATTTTACGAA CCTTAACCGT TACAGGAGAA
GGAATAGAGA GAATTCCTGC TACGGTTGCT CAAGTCGAAT TAGGGGTAGA AATTCAAGGA
CAAAATGCAG CCACTGTTCA ACAGGAAGTC GCTAAACGAA CCAGTGCAGT TGTAGAATTA
CTCCAAAGTC GTAATGTTCA ACAGCTACAA ACTACAGGCA TTCGATTACA GCCGAATTAT
GATTTTAGCA ATAACCAAAG ACGGTTAATC GGTTATATAG GAGTCAATAC GGTCAGTTTT
AGGTTTCCCA TCGAACAAGT CGGGGGATTA TTAGATCATG TGGTGAAAGT GGGAGCGACT
CGGATTGATA ATATTAGTCT AACGGCGACA GAGGAAGCGA TTACCCAAGC TCAACGACAA
GCTTTACAAC AAGCAACGGT AGATGCTCAA CAACAAGCGG ATGTGGTTTT AAGATCTCTC
AATCTCACGG CGAATCAAAT TGTCAGTATT CAAATTAATG GGGCTAACTT ACCACAGCCT
AAAATCCTTC AAAATGAACA ATTTGCGCTT AGGGCGGATG CACCTGCGCC GAGTACCCCC
GTCATTGGTG GAGAACAAAC GGTTCGCGCT TCTGTGACAC TACAAATTAG TTACTAG
 
Protein sequence
MLPVISSRKL IIALSYLSLT FMQPAFAQEQ ILRTLTVTGE GIERIPATVA QVELGVEIQG 
QNAATVQQEV AKRTSAVVEL LQSRNVQQLQ TTGIRLQPNY DFSNNQRRLI GYIGVNTVSF
RFPIEQVGGL LDHVVKVGAT RIDNISLTAT EEAITQAQRQ ALQQATVDAQ QQADVVLRSL
NLTANQIVSI QINGANLPQP KILQNEQFAL RADAPAPSTP VIGGEQTVRA SVTLQISY