Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3080 |
Symbol | |
ID | 7107863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 3443639 |
End bp | 3444355 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643481323 |
Product | protein of unknown function DUF541 |
Protein accession | YP_002378350 |
Protein GI | 218440021 |
COG category | [S] Function unknown |
COG ID | [COG2968] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.438454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACCTG TAATTTCTTC AAGAAAATTA ATTATTGCCC TTAGCTACTT AAGTCTTACC TTTATGCAGC CCGCTTTTGC TCAGGAACAA ATTTTACGAA CCTTAACCGT TACAGGAGAA GGAATAGAGA GAATTCCTGC TACGGTTGCT CAAGTCGAAT TAGGGGTAGA AATTCAAGGA CAAAATGCAG CCACTGTTCA ACAGGAAGTC GCTAAACGAA CCAGTGCAGT TGTAGAATTA CTCCAAAGTC GTAATGTTCA ACAGCTACAA ACTACAGGCA TTCGATTACA GCCGAATTAT GATTTTAGCA ATAACCAAAG ACGGTTAATC GGTTATATAG GAGTCAATAC GGTCAGTTTT AGGTTTCCCA TCGAACAAGT CGGGGGATTA TTAGATCATG TGGTGAAAGT GGGAGCGACT CGGATTGATA ATATTAGTCT AACGGCGACA GAGGAAGCGA TTACCCAAGC TCAACGACAA GCTTTACAAC AAGCAACGGT AGATGCTCAA CAACAAGCGG ATGTGGTTTT AAGATCTCTC AATCTCACGG CGAATCAAAT TGTCAGTATT CAAATTAATG GGGCTAACTT ACCACAGCCT AAAATCCTTC AAAATGAACA ATTTGCGCTT AGGGCGGATG CACCTGCGCC GAGTACCCCC GTCATTGGTG GAGAACAAAC GGTTCGCGCT TCTGTGACAC TACAAATTAG TTACTAG
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Protein sequence | MLPVISSRKL IIALSYLSLT FMQPAFAQEQ ILRTLTVTGE GIERIPATVA QVELGVEIQG QNAATVQQEV AKRTSAVVEL LQSRNVQQLQ TTGIRLQPNY DFSNNQRRLI GYIGVNTVSF RFPIEQVGGL LDHVVKVGAT RIDNISLTAT EEAITQAQRQ ALQQATVDAQ QQADVVLRSL NLTANQIVSI QINGANLPQP KILQNEQFAL RADAPAPSTP VIGGEQTVRA SVTLQISY
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