Gene PCC7424_3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3077 
Symbol 
ID7107860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3438056 
End bp3439927 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content36% 
IMG OID643481320 
Producttoll-interleukin receptor 
Protein accessionYP_002378347 
Protein GI218440018 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.783629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACC AAGTAACCAA TATTAACAGT TTCCCAGTCC GTAGAGTTCA TACTAAACCG 
CTAAAATCTC TGAATTATCG GTTAAAAATG ACTTTTCCTC AAGGCCAGCA AGAACAAAAA
GAAACTTTTC TCCCCATAGG GAAAAAAACA ACTAATTCAG CCATTTATAA TCAAAAAAAA
GCTTCTCCTC ATTCAAAAAA AGTTGTAGCC CAAAAAGTGA GTGGCAAAGA GAGTCAAAAA
AATAATCGTT CAAGTCTAAA AATTCAGAAA AAAAACTCGA CAATTGCTTT AAATGATTAT
TCAGTAGCCT CTAAACCTAA AAAGAAAATT TTAATAGCCT ATCCTCAACA AGAATTAGAA
ATAAGTATTG CCGACGCATT AGCCCAAGAG TTAGCCGGTG CTGGATATGA TATATTTATG
GGGACTCGCC AAAGTATTTG TCAAGGCAAT ATTTGGACTC AACAAATTGA AGCCGAATAT
CAACAAAGTG ATTGTTTAAT ATTTTTATTA ACCCAGTCCT CTTTAATTAG TGAATTAGCG
ACAGAAGCCC TAAAACGAGC TATCACAATT AGCAAAACTC GTCAAGAGCA AAAACCCCTG
ATCATCGTCA TTGGTGTTAA TATCGCTTCA AATACCCCCG TTAGCTATAA ACTTCAAAGC
TATCTCAATC AAATTCAACA ATGGCAATGG AATAGTCCAG AAGATACCCA TAAAATAATA
GAAACTATCC TGAATCAATT AGGGCAATTC CCCGATAAAT CTACCCCTTT ACCTCCTCAA
TTATTAAATC TTTCAAATAA TAGTCAATCA AAAATTAATC CGACTTCCTC AACTAATCGT
CCTGTATATT CTACCCAACC TCAGCTATCA ACAGAGAGGG AAGGATTAAA CACTCCTTTT
TATTTGGAGA GAATGCCCTA TCAACAGCAA TGTTATCAAA AAATAGTGAA ACCAGGGGCT
TTAATTCGGA TTTGCGCCCC AAGACAGATG GGGAAAACCT CTCTACTCAA TCGGATTTTA
AGCTATGCTG TCAAGCAAAA TTATCATACA GTTTTATTAG ACTTTCAACA TACAGATAAA
CAAATTTTGA CCAATTTAGA TCAATTGGTT CATTGGTTTT GTTTGGCTAT TGCTAAACAG
CTAAACTTAC CTCCTAATTT AGAGGAGTAT TGGAATGAAG ATTTCGGAAT CAAAGCAAGT
AGCTCTATTT ATTTAGAAGA TTATATCCTT AGAACGATTA AAGAGCCTAT CGTCATAGCT
ATAGAAGAAA TTAGTGCTAT TTTTGAAGAA ATTGGCGTTA CTCAAGATTT TTTAAGCTTA
CTTAGATGTT GGCATGAAAA AGCTAAAGTT AATCCCCTTT GGGCTAAACT AAGATTAGTC
CTAGTACAGT CAACCGATGC TTATATTCCC CTGAATATTA ATCAATCTCC CCTCAATGTT
GGACTAGGAA TTCACTTACC GTCCTTTAGT TTAGAAGAAG TAGAAACGCT AGTTAGACAT
GATCAATTAA GCCTCTCTCC TCAAGAGATG AACCAGTTAA TGAAGCTTTT AGGCGGACAT
CCCTATTTAA TTCAACTATC CTTGTATTAT CTCTCCCAAA AAAAATTAAC TGTGTCGGAA
TTATTAGAAA CCCCCTTGAC TGATTCGGGC ATATACAACG ATCACCTTTA TTGTTTATAC
TGGAAGTTAC AACAAGCTCC TCATCTGATG CCTCCTTTCC AACAAGTTTT ATTATCCCCT
TCTCCTGTCC CGTTAGAACA CCATCTAGGA TGTCAGTTAA AAAGTTTAGG GTTAGTCACG
GTCAATAATG GGCAATATTC TGTATCCTGT GAGTTATATC AGCGTTATTT TAGCGATCGC
CTGATCAATT AA
 
Protein sequence
MMNQVTNINS FPVRRVHTKP LKSLNYRLKM TFPQGQQEQK ETFLPIGKKT TNSAIYNQKK 
ASPHSKKVVA QKVSGKESQK NNRSSLKIQK KNSTIALNDY SVASKPKKKI LIAYPQQELE
ISIADALAQE LAGAGYDIFM GTRQSICQGN IWTQQIEAEY QQSDCLIFLL TQSSLISELA
TEALKRAITI SKTRQEQKPL IIVIGVNIAS NTPVSYKLQS YLNQIQQWQW NSPEDTHKII
ETILNQLGQF PDKSTPLPPQ LLNLSNNSQS KINPTSSTNR PVYSTQPQLS TEREGLNTPF
YLERMPYQQQ CYQKIVKPGA LIRICAPRQM GKTSLLNRIL SYAVKQNYHT VLLDFQHTDK
QILTNLDQLV HWFCLAIAKQ LNLPPNLEEY WNEDFGIKAS SSIYLEDYIL RTIKEPIVIA
IEEISAIFEE IGVTQDFLSL LRCWHEKAKV NPLWAKLRLV LVQSTDAYIP LNINQSPLNV
GLGIHLPSFS LEEVETLVRH DQLSLSPQEM NQLMKLLGGH PYLIQLSLYY LSQKKLTVSE
LLETPLTDSG IYNDHLYCLY WKLQQAPHLM PPFQQVLLSP SPVPLEHHLG CQLKSLGLVT
VNNGQYSVSC ELYQRYFSDR LIN