| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3056 |
|---|
| Symbol | |
|---|
| ID | 7110160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 3413029 |
|---|
| End bp | 3414288 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643481299 |
|---|
| Product | rod shape-determining protein RodA |
|---|
| Protein accession | YP_002378326 |
|---|
| Protein GI | 218439997 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.176215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTACAAA GAACCTTTTT ACCGAGACTC AATTGGAAAT TGTGGTTTTC TACTCTGCCT
CAAGTCGATT GGTTTTTATT TCTGCTTGTG GTGGGGATAA GTGCCTTTGG CGGATTGATG
ATTCGCAGTA CCGAACTCCA CGAAGCCTCA ATTGATTGGT GGCAACATTG GATTTTTGGA
GCAGTAGGAA CTGTTATCGC CTTATTATTA GCTCGTTGGC GTTATGAATT TTTGATGCAA
TGGCATTGGG TAACATACAC CATCACGAAT TTGTCTCTGA TTACCGTGAT TATTATTGGG
GTAACGGCTA ATGGGGCGCA AAGTTGGATT AATATTGGTG GGTTTAACGT TCAACCCTCT
GAATTTGCCA AGGTTGGATT AATTATTTCT CTGGCGGCTC TCCTGCACCA AAAACCAGCC
ACAACTTTAC CGAATGTCTT TCGCGTTTTG GGTGTTACTG TCGTTCCTTG GGTCTTAATT
ATGTTACAAC CGGACTTAGG AACGGGATTA GTGTTTGCGG CGATAACCTT GGGAATGCTT
TACTGGGCAA ATATCAATCC GGGATGGTTA ATTTTAATGT TATCCCCTCT GATTTCCATG
TTTGCCTACA ATTTATTGTT TCCGGCTTGG ATTGTTTGGG CGATGGCTAT GGGAATCATT
GCCTGGTTAA CTCTCCCGTT AAGATTTCTG TCCGCCATCG GAGCAATTTT AGCCAACTTT
GCCGCCGGCA AACTGAGCGG AATTATGTGG AATCTTTTAA AAGATTATCA AAAAGACCGG
TTTACTAGCT TTCTCGACCC GGAAAAAGAC CCCCTCGGCG CAGGATATCA GTTGCTTCAG
TCTCGTATTG CCATTGGTTC GGGAGAACTT TGGGGAAGGG GATTATTTAA TGGCACTCAA
ACCCAACTCA ATTTTATTCC TGAACAACAC ACAGACTTTA TTTTTTCATC CGTTGGAGAA
GAATTCGGGT TTGTCGGTTC AATTGCCGTT TTATTAGGGT TTTGGCTCAT CTGTTGGCGA
CTTTTGGTGA TTGCCTTGAA AGCTAAAGAA AATTTCGGCT CTTTACTGGC GATCGGTGTT
TTATCGATGA TTGCTTTTCA GGTGGTGCTT AATATCAGTA TGACCGTTGG ATTAGCTCCC
ATTACCGGAA TTCCCTTACC TTGGATGAGT TATGGACGTT CTGCATTATT AACTAACTTT
ATTGCTTTGG GGTTAGTAGA ATCGGTGGCT AATTACCGAC CAAGAAAAAG ATTATATTAA
|
|---|
| Protein sequence | MLQRTFLPRL NWKLWFSTLP QVDWFLFLLV VGISAFGGLM IRSTELHEAS IDWWQHWIFG
AVGTVIALLL ARWRYEFLMQ WHWVTYTITN LSLITVIIIG VTANGAQSWI NIGGFNVQPS
EFAKVGLIIS LAALLHQKPA TTLPNVFRVL GVTVVPWVLI MLQPDLGTGL VFAAITLGML
YWANINPGWL ILMLSPLISM FAYNLLFPAW IVWAMAMGII AWLTLPLRFL SAIGAILANF
AAGKLSGIMW NLLKDYQKDR FTSFLDPEKD PLGAGYQLLQ SRIAIGSGEL WGRGLFNGTQ
TQLNFIPEQH TDFIFSSVGE EFGFVGSIAV LLGFWLICWR LLVIALKAKE NFGSLLAIGV
LSMIAFQVVL NISMTVGLAP ITGIPLPWMS YGRSALLTNF IALGLVESVA NYRPRKRLY
|
|---|
| |